| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3171156 | 64 (1.090) | 4 (0.080) | 3/130 | 6.6 | 6.6% | intergenic (+42/‑241) | ygjR/ygjT | predicted NAD(P)‑binding dehydrogenase/predicted inner membrane protein, part of terminus |
| ? | REL606 | = 3171165 | 58 (1.140) | intergenic (+51/‑232) | ygjR/ygjT | predicted NAD(P)‑binding dehydrogenase/predicted inner membrane protein, part of terminus | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACG > REL606/3171082‑3171231 | gTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTg < 1:470952/76‑1 (MQ=255) tGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGa < 2:93969/76‑1 (MQ=255) tGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGa > 2:273181/1‑76 (MQ=255) gATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGAc > 1:1822669/1‑76 (MQ=255) aTTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACt < 1:391741/76‑1 (MQ=255) ttttCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTgg > 1:1382413/1‑76 (MQ=255) ggCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAAt < 1:1065255/76‑1 (MQ=255) gCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATg < 2:147526/76‑1 (MQ=255) cAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATgg > 1:68372/1‑76 (MQ=255) aTAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCt < 1:638737/76‑1 (MQ=255) aTAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCt > 1:221596/1‑76 (MQ=255) gCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTc < 2:4204/76‑1 (MQ=255) gCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTc < 1:730040/76‑1 (MQ=255) cGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCa > 2:872967/1‑76 (MQ=255) ntAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCAt > 1:220343/2‑76 (MQ=255) tAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATa > 2:1780155/1‑76 (MQ=255) tAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATa > 2:1614638/1‑76 (MQ=255) aaaaCTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATAc > 1:764316/1‑76 (MQ=255) aaCTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACtt > 1:3266/1‑76 (MQ=255) aCTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACttt < 2:341523/76‑1 (MQ=255) cTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTg > 2:1263005/1‑76 (MQ=255) tataATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGt < 2:509716/76‑1 (MQ=255) taATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTa < 1:69308/76‑1 (MQ=255) taATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTa > 1:110842/1‑76 (MQ=255) aaTTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTAc > 2:666074/1‑76 (MQ=255) aaTTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTAc < 2:193703/76‑1 (MQ=255) aaTTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTAc < 1:1459542/76‑1 (MQ=255) aaTTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTAc > 1:1845594/1‑76 (MQ=255) aTTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTAcc < 1:466774/76‑1 (MQ=255) ttGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCt < 2:688348/76‑1 (MQ=255) ttGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCt > 1:1653172/1‑76 (MQ=255) tGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTg > 1:734421/1‑76 (MQ=255) tGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTg > 1:804441/1‑76 (MQ=255) tGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTg > 1:1253019/1‑76 (MQ=255) tGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTg > 1:1127215/1‑76 (MQ=255) cAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCaa > 1:774535/1‑76 (MQ=255) aaaGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCaaa > 1:1280954/1‑76 (MQ=255) aaaGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCaaa < 2:1761881/76‑1 (MQ=255) aGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAgg < 2:1213937/76‑1 (MQ=255) aGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAgg > 1:1526449/1‑76 (MQ=255) tAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAgggg > 2:938213/1‑76 (MQ=255) tAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAgggg > 2:66014/1‑76 (MQ=255) aaCAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGt > 2:1550933/1‑76 (MQ=255) aaCAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGt < 2:1283425/76‑1 (MQ=255) aaCAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGt < 2:214458/76‑1 (MQ=255) aaCAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGt < 1:1218363/76‑1 (MQ=255) aGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAAc < 2:959792/76‑1 (MQ=255) gtAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTc < 1:65089/76‑1 (MQ=255) aaaaGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCAt > 1:410771/1‑76 (MQ=255) aaaaGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCAt > 1:1300402/1‑76 (MQ=255) aaaaGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCAt > 1:492831/1‑76 (MQ=255) aaGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTg > 1:843506/1‑76 (MQ=255) aaGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTg > 2:942061/1‑76 (MQ=255) gTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCg < 2:124688/76‑1 (MQ=255) gTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCg > 1:648198/1‑76 (MQ=255) gTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCg < 2:216755/76‑1 (MQ=255) tAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGa > 1:1352346/1‑76 (MQ=255) tAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGa > 2:693342/1‑76 (MQ=255) tAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGa > 2:1567917/1‑76 (MQ=255) aGACCATTGACTGGCTGAATGGCCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGt < 1:213556/76‑1 (MQ=255) ccATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCAt > 1:1287626/1‑76 (MQ=255) cATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCAtt < 1:430658/76‑1 (MQ=255) aTTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTa < 2:528318/76‑1 (MQ=255) tGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACg < 2:1608459/76‑1 (MQ=255) | GTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACG > REL606/3171082‑3171231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |