| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,571,131 | +GTACA | coding (332/435 nt) | uspA → | universal stress global response regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3571129 | 2 (0.040) | 48 (0.880) +CAGTA |
39/136 | 0.3 | 96.2% | coding (330/435 nt) | uspA | universal stress global response regulator |
| ? | REL606 | 3571130 = | 2 (0.030) | coding (331/435 nt) | uspA | universal stress global response regulator | |||||
GAGCGGCAGCGGCGACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTCACCACCAGGACTTCTGGAGCAAACTGATGTCTTCCGCACGTCAGCTGATCAACACCGTTC > REL606/3571054‑3571190 | gAGCGGCAGCGGCGACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGt < 2:1710191/76‑1 (MQ=255) gcggcagcggcGACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTca < 1:806606‑M1/76‑3 (MQ=255) gcggcagcggcGACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTca < 1:806584‑M1/76‑3 (MQ=255) cggcagcggcGACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcag < 1:982285‑M1/76‑4 (MQ=255) agcggcGACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtaca > 1:854604‑M1/1‑69 (MQ=255) ggcgACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacacca < 1:1806764‑M1/76‑11 (MQ=255) gcgACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccac < 1:1083323‑M1/76‑12 (MQ=255) cgACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccacc > 1:1142578‑M1/1‑64 (MQ=255) gACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccacca < 2:301899‑M1/76‑14 (MQ=255) aCCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccag < 1:43785‑M1/76‑15 (MQ=255) ccTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATTTGGTGGTTTGTGGTcagtacaccaccagg < 1:1438507‑M1/76‑16 (MQ=255) cTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccagga > 1:1651649‑M1/1‑60 (MQ=255) tGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggac < 2:1346584‑M1/76‑18 (MQ=255) gggCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggact < 2:1036295‑M1/76‑19 (MQ=255) ggCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggactt < 2:1190717‑M1/76‑20 (MQ=255) ccAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttct < 2:1362008‑M1/76‑22 (MQ=255) aaGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctgg < 2:1625909‑M1/76‑24 (MQ=255) aGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctgga > 1:1738394‑M1/1‑52 (MQ=255) aGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctgga < 1:93334‑M1/76‑25 (MQ=255) gTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggag < 2:675115‑M1/76‑26 (MQ=255) tGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaa > 1:1653620‑M1/1‑47 (MQ=255) ggTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaac > 2:22497‑M1/1‑46 (MQ=255) aTGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatg > 1:435401‑M1/1‑41 (MQ=255) tGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgt < 2:1140570‑M1/76‑37 (MQ=255) tGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgt < 1:1474011‑M1/76‑37 (MQ=255) gCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtc > 2:1244897‑M1/1‑39 (MQ=255) gCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtc < 2:10773‑M1/76‑38 (MQ=255) aTCAAGAAATACGATATGGATCTGGTGGTTTGTGGTCACCACCAGGACTTCTGGAGCAAACTGATGTCTTCCGCAc > 1:529438/1‑76 (MQ=255) tCAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttcc < 1:298618‑M1/76‑42 (MQ=255) cAAGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccg < 2:945667‑M1/76‑43 (MQ=255) aaGAAATACGATATGGATCTGGTGGTTTGTGGTgagtacaccaccaggacttctggagcaaactgatgtcttccgc < 2:473189‑M1/76‑44 (MQ=255) aaGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgc > 1:940276‑M1/1‑33 (MQ=255) aaGAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgc > 2:1355104‑M1/1‑33 (MQ=255) gAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcac < 1:443803‑M1/76‑46 (MQ=255) gAAATACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcac > 2:784905‑M1/1‑31 (MQ=255) aaaTACGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacg > 1:267665‑M1/1‑30 (MQ=255) aCGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcag > 1:834474‑M1/1‑26 (MQ=255) aCGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcag < 1:1212095‑M1/76‑51 (MQ=255) cGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagc < 1:414057‑M1/76‑52 (MQ=255) cGATATGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagc < 2:1599441‑M1/76‑52 (MQ=255) atatGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctg > 1:304818‑M1/1‑23 (MQ=255) atatGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctg > 2:1033508‑M1/1‑23 (MQ=255) tatGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctga > 1:257187‑M1/1‑22 (MQ=255) tatGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctga > 1:1562972‑M1/1‑22 (MQ=255) tatGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctga > 2:1492320‑M1/1‑22 (MQ=255) tatGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctga > 1:350490‑M1/1‑22 (MQ=255) atGGATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctgat < 2:1399018‑M1/76‑56 (MQ=255) ggATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctgatca > 2:658463‑M1/1‑19 (MQ=255) ggATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctgatca > 1:1028149‑M1/1‑19 (MQ=255) gATCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctgatcaa > 1:1793745‑M1/1‑18 (MQ=255) gATCTGGTGGTTTGTGGTCACCACCAGGACTTCTGGAGCAAACTGATGTCTTCCGCACGTCAGCTGATCAACACCg > 2:171054/1‑76 (MQ=255) aTCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctgatcaac > 2:254203‑M1/1‑17 (MQ=255) aTCTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctgatcaac > 2:821261‑M1/1‑17 (MQ=255) cTGGTGGTTTGTGGTcagtacaccaccaggacttctggagcaaactgatgtcttccgcacgtcagctgatcaacac > 2:580604‑M1/1‑15 (MQ=255) | GAGCGGCAGCGGCGACCTGGGCCAAGTTCTGGTCGATGCAATCAAGAAATACGATATGGATCTGGTGGTTTGTGGTCACCACCAGGACTTCTGGAGCAAACTGATGTCTTCCGCACGTCAGCTGATCAACACCGTTC > REL606/3571054‑3571190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |