| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,270,445 | IS150 (+) +2 bp :: +CGT | intergenic (+23/+24) | nlp → / ← murA | DNA‑binding transcriptional activator of maltose metabolism/UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590472 | NA (NA) | 70 (1.230) +GT |
48/146 | 0.1 | 98.6% | intergenic (+27/‑71) | insK‑1/hokE | IS150 putative transposase; b3558_1/toxic polypeptide, small |
| ? | REL606 | 3270445 = | 1 (0.020) | intergenic (+23/+25) | nlp/murA | DNA‑binding transcriptional activator of maltose metabolism/UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase | |||||
| * | ? | REL606 | = 2775877 | NA (NA) | 73 (1.240) | 37/150 | 0.5 | 98.6% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 3270446 | 1 (0.020) | intergenic (+24/+24) | nlp/murA | DNA‑binding transcriptional activator of maltose metabolism/UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase | |||||
Only 100 of 150 total aligned reads displayed.
GTTTATCGACAGAACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCT > REL606/3270371‑3270521 | gTTTATCGACAGAACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTa > 2:1241551/1‑76 (MQ=255)actccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTa < 1:1562763‑M2/2‑1 (MQ=255) ctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTAc > 2:909660‑M2/74‑76 (MQ=255) ttATCGACAGAACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtg < 2:1644898‑M2/76‑3 (MQ=255) tccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACg < 2:456084‑M2/4‑1 (MQ=255) ccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACgg > 1:1225124‑M2/72‑76 (MQ=255) aTCGACAGAACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgta < 1:1545451‑M2/76‑5 (MQ=255) aattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACgggg < 2:1398931‑M2/7‑1 (MQ=255) aattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACgggg > 1:1582920‑M2/70‑76 (MQ=255) cGACAGAACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtact > 2:406115‑M2/1‑70 (MQ=255) cGACAGAACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtact > 1:569827‑M2/1‑70 (MQ=255) ttgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCt < 1:1637301‑M2/9‑1 (MQ=255) aCAGAACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgc < 1:1194852‑M2/76‑9 (MQ=255) aatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGcc < 2:1716575‑M2/12‑1 (MQ=255) aatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGcc < 2:1666681‑M2/12‑1 (MQ=255) cAGTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattt < 1:426417‑M2/76‑17 (MQ=255) aGTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccatttt < 1:1121786‑M2/76‑18 (MQ=255) gTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttg > 2:1152247‑M2/1‑58 (MQ=255) aatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAgctttaa < 2:846521‑M2/20‑3 (MQ=255) aatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCa > 1:1348895‑M2/57‑76 (MQ=255) tGATGCGTAGCTACACTAAACCGACAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacacattttgtt < 2:420852‑M2/76‑21 (MQ=255) tGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgtt < 2:768038‑M2/76‑21 (MQ=255) gATGCGTAGCTACTCTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttg > 1:327883‑M2/1‑55 (MQ=255) cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGAc > 1:986295‑M2/54‑76 (MQ=255) agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACg < 1:11878‑M2/24‑1 (MQ=255) aTGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttgg > 1:1600708‑M2/1‑54 (MQ=255) aTGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttgg > 2:1616877‑M2/1‑54 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGacgtt > 1:889901‑M2/51‑74 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGAt > 2:163925‑M2/51‑76 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGAtt < 2:1247400‑M2/27‑1 (MQ=255) gTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGCAGCCCCGCGTAtgtactgcacccattttgttggacga < 1:648976‑M2/76‑27 (MQ=255) tAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgat > 1:206885‑M2/1‑49 (MQ=255) tAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgat < 2:105562‑M2/76‑28 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGAcgattgcc < 2:215997‑M2/30‑4 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACt < 1:1832155‑M2/30‑1 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTc < 2:121978‑M2/31‑1 (MQ=255) acacTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgatgaaat < 1:1056547‑M2/76‑33 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCt > 2:594526‑M2/42‑76 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCt < 2:728034‑M2/35‑1 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCt > 1:1669779‑M2/42‑76 (MQ=255) cacTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccgttttgttggacgatgaaatg > 2:883019‑M2/1‑43 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCtt < 2:565360‑M2/36‑1 (MQ=255) acTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgatgaaatgg < 1:572236‑M2/76‑35 (MQ=255) tgtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTcac > 2:1747220‑M2/37‑76 (MQ=255) ngtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTcac > 1:87358‑M2/37‑76 (MQ=255) gtttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTcaca < 1:1168525‑M2/41‑1 (MQ=255) aCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgatgaaatggaatag > 1:81682‑M2/1‑37 (MQ=255) tttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCacac > 2:1859669‑M2/35‑76 (MQ=255) tttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCacac > 2:641760‑M2/35‑76 (MQ=255) ccGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgatgaaatggaatagc > 2:150661‑M2/1‑36 (MQ=255) ttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACg < 2:1528181‑M2/43‑1 (MQ=255) ttaactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACg < 2:222246‑M2/43‑1 (MQ=255) aactgtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCt < 1:1396247‑M2/45‑1 (MQ=255) aaaaTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgatgaaatggaatagccccta < 2:1301141‑M2/76‑46 (MQ=255) gtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAat > 1:1471683‑M2/28‑76 (MQ=255) gtccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAat < 1:1675808‑M2/49‑1 (MQ=255) aaTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 2:1737562‑M2/1‑29 (MQ=255) tccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAata > 2:484604‑M2/27‑76 (MQ=255) aTGATTGGTCTGGGGGTAGCCCCGCGTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 2:185632‑M2/1‑28 (MQ=255) aTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 2:225691‑M2/1‑28 (MQ=255) ccaactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAatat < 1:305962‑M2/51‑1 (MQ=255) caactttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATAtt < 2:1200527‑M2/52‑1 (MQ=255) actttttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTg > 1:1325641‑M2/23‑76 (MQ=255) tGGTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca < 2:1450161‑M2/76‑54 (MQ=255) ggTCTGGCGGTAGCCCCGCGTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa < 2:253733‑M2/76‑55 (MQ=255) tttggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCAcc > 2:1800345‑M2/19‑76 (MQ=255) tggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTa > 2:275642‑M2/17‑76 (MQ=255) tggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTa < 1:1848515‑M2/60‑1 (MQ=255) tggggtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTa < 2:236163‑M2/60‑1 (MQ=255) gtcagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAgc > 1:382385‑M2/13‑76 (MQ=255) tAGCCCCGCGTCCGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAgcgc < 2:497258/76‑1 (MQ=255) cagtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAgcgc > 1:1268593‑M2/11‑76 (MQ=255) agtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAgcgcg > 2:749893‑M2/10‑76 (MQ=255) agtacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAgcgcg > 2:648870‑M2/10‑76 (MQ=255) agtacacgtTACAGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAgcgcg > 2:556017‑M2/10‑76 (MQ=255) aGCCCCGCGTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac < 1:1296501‑M2/76‑66 (MQ=255) tacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCa > 2:953367‑M2/8‑76 (MQ=255) tacacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCa > 1:54983‑M2/8‑76 (MQ=255) acacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAg > 1:1727780‑M2/7‑76 (MQ=255) acacgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAg > 2:766350‑M2/7‑76 (MQ=255) tttgtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGt > 2:1818740‑M2/6‑76 (MQ=255) tangtTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGt > 2:1321657‑M2/6‑76 (MQ=255) gcgTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt > 2:3861‑M2/1‑5 (MQ=255) cccatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg < 2:597712‑M2/73‑73 (MQ=255) tTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGt < 1:820286‑M2/75‑1 (MQ=255) gTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga < 2:1395334‑M2/76‑74 (MQ=255) gTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga > 1:1393142‑M2/1‑3 (MQ=255) gTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga < 1:1748216‑M2/76‑74 (MQ=255) gTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga < 1:700660‑M2/76‑74 (MQ=255) gTAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga > 2:977136‑M2/1‑3 (MQ=255) ccatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga < 1:1142968‑M2/74‑74 (MQ=255) ccatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga < 1:955662‑M2/74‑74 (MQ=255) tAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa < 2:1615205‑M2/76‑75 (MQ=255) tAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa > 1:481227‑M2/1‑2 (MQ=255) tAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa > 2:832841‑M2/1‑2 (MQ=255) tAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa > 2:1481027‑M2/1‑2 (MQ=255) tAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa < 1:1494850‑M2/76‑75 (MQ=255) atgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttggaa > 1:1663303‑M2/1‑1 (MQ=255) atgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa < 1:1219861‑M2/76‑76 (MQ=255) aCGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCt > 1:185206/1‑76 (MQ=255) | GTTTATCGACAGAACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACCTAAAGCGCGCAGTTTGTCT > REL606/3270371‑3270521 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |