| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3021547 | 79 (1.270) | 5 (0.100) | 3/126 | 6.8 | 6.1% | coding (1138/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | = 3021727 | 89 (1.710) | coding (958/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAACACAACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3021461‑3021547‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaatattttaTTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTATTCC < REL606/3021727‑3021653 AAACACAACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACA > 2:1914888/1‑76AAACACAACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTCACAACA > 2:1914907/1‑76 AACACAACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATACTCATCATCCTGACAACAA > 1:208234/1‑76 AACACAACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAA > 2:660538/1‑76 ACAACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAA > 1:1027447/1‑76 ACAACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAA < 1:880417/76‑1 ACAACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAA > 2:1564896/1‑76 ACAACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAA < 2:427281/76‑1 AACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATA > 2:719392/1‑76 CAATAACAACAACAAGAGATATAAATTCTTAATCGCACTCATAAAAAATAATCATCATCCTGACAACAAGAATATT < 2:280474/76‑1 ATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTT < 1:196016/76‑1 ATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTT < 1:1413720/76‑1 TAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTA < 1:1496357/76‑1 TAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTA < 2:1945457/76‑1 TATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTATTTGATAAGGTGGTGg > 2:907049/1‑75 TAAAAAATAATCATCATCCTGACAACAAGAATATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATG > 2:994369/1‑76 AATAATCATCATCCTGACAACAAGAATATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTA > 2:107586/1‑76 AATAATCATCATCCTGACAACAAGAATATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTA > 2:780996/1‑76 AATAATCATCATCCTGACAACAAGAATATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTA > 2:781919/1‑76 GAATATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATA < 2:122673/76‑1 GAATATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATA < 2:497199/76‑1 GAATATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATA < 2:927214/76‑1 AATATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATAT < 2:1753503/76‑1 ATATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATC > 1:1564896/1‑76 ATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTT < 1:1425641/76‑1 ATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTT < 1:1646411/76‑1 ATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTT < 2:600565/76‑1 ATTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTT < 2:600570/76‑1 TTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTA < 2:808388/76‑1 TTTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTA < 2:517671/76‑1 TTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTAT < 2:1565824/76‑1 TTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTAT > 1:1052145/1‑76 TTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTAT < 2:670847/76‑1 TTTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTAT < 2:303515/76‑1 TTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTATT > 1:493590/1‑76 TTATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTATT > 2:100467/1‑76 TATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTATTC > 1:722608/1‑76 TATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTATTC < 2:1311724/76‑1 TATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTATTC > 2:1930492/1‑76 ATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTATTCC < 1:243733/76‑1 ATTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTATTCC < 2:1082428/76‑1 AAACACAACAATAACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3021461‑3021547‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaatattttaTTTGATAAGGTGGTGTGTAATTCAAGTATTCCATCATGCCCTAATGATATAATTGATTACATGATATCTTATTCC < REL606/3021727‑3021653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |