| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 671327 | 76 (1.230) | 4 (0.070) | 4/130 | 6.4 | 5.9% | intergenic (+16/+111) | ECB_00624/lnt | conserved hypothetical protein/apolipoprotein N‑acyltransferase |
| ? | REL606 | = 671328 | 61 (1.140) | intergenic (+17/+110) | ECB_00624/lnt | conserved hypothetical protein/apolipoprotein N‑acyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAGGCAGTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACATATTGCAAAA > REL606/671255‑671400 | caggcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAAt < 2:1112114/76‑1 (MQ=255)caggcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAAt < 1:662022/76‑1 (MQ=255) ggcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCa < 1:105658/76‑1 (MQ=255) ggcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCa < 1:452554/76‑1 (MQ=255) ggcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCa < 1:25963/76‑1 (MQ=255) gcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGTTAATCAt > 2:468424/1‑76 (MQ=255) gcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCAt < 1:1663815/76‑1 (MQ=255) gcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCAt < 2:1649019/76‑1 (MQ=255) gcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCAt < 2:13970/76‑1 (MQ=255) gcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCAt < 2:187278/76‑1 (MQ=255) gcagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCAt < 2:1130004/76‑1 (MQ=255) cagTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATg < 1:580673/76‑1 (MQ=255) agTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGc > 2:1618238/1‑76 (MQ=255) ttATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGccc < 2:300394/76‑1 (MQ=255) tATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATTcccc > 1:531928/1‑76 (MQ=255) aTTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCca > 2:831942/1‑76 (MQ=255) tCGTCATCCCCAATATGGCAACGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCcaca < 2:410340/76‑1 (MQ=255) cGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAg < 1:49209/76‑1 (MQ=255) cATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCgt > 2:1046587/1‑76 (MQ=255) cccAATATGGCAATGTGGCTTGTACCCCTGAACCGAAAGAAAAGGGGGCATGATAATCATGCCCCACAGCGTGTTg < 2:1301239/76‑1 (MQ=255) ccAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTga < 2:352493/76‑1 (MQ=255) cAATATGGCAATGTGTCTTGTACCCCTGAACCGTAAAAAAAAGGGGCATAATAATCATGCCCCACAGCGTGTTgag < 1:445049/76‑1 (MQ=255) aaTATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGGGTTgaga > 2:885765/1‑76 (MQ=255) atatGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGaa > 2:298990/1‑76 (MQ=255) tatGGCAATGTGGCTTGTATCCCTCAACCGTAAGAAAAAGGGGCATCATAATCATGCCCCACAGCGTGTTGAGaaa < 2:460547/76‑1 (MQ=255) aatGGCAATGTTTCTTGTATCCCAAACCCGTAAAAAAAGGGGGCATGATAATCATGCCCCACAGCGTGTTGAGaaa < 2:715550/75‑1 (MQ=255) agggCAATGTGGCTTGTATCCCGGAACCGTAAAAAAAAGGGGCATAATAATCATGCCCCACAGCGTTTTGAGAAAg < 2:1240317/74‑1 (MQ=255) gCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTAc < 2:570191/76‑1 (MQ=255) aaTGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGc > 2:1153673/1‑76 (MQ=255) gtgGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCttt < 2:357659/76‑1 (MQ=255) gtgGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGAACGCttt > 2:394541/1‑76 (MQ=255) gtgGCTCGTACCCCGGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCttt < 2:779446/76‑1 (MQ=255) tgGCTTGTACCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTa < 2:626154/76‑1 (MQ=255) tgGCTTGTACCCCTAACCCGAAAAAAAAAGGGGAATTTTAACCATCCCCCACAGCGTGTTGAGAAAGTACGCTTTa < 1:468424/76‑1 (MQ=255) ggCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTAt < 2:1699904/76‑1 (MQ=255) cTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATcc > 2:628129/1‑76 (MQ=255) tGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTa < 1:378219/76‑1 (MQ=255) tATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGCGTTGAGAAAGTACGCTTTATCCTACa > 2:700154/1‑76 (MQ=255) accccTAACCCGAAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACaa < 1:1967772/74‑1 (MQ=255) aTCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACaa > 2:313176/1‑76 (MQ=255) cccTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACaaaa < 2:395154/76‑1 (MQ=255) cccAGAACCGAAAAAAAAAGGGGCAGGATAATCGGCCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACaaaa < 1:245504/76‑1 (MQ=255) ccTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAAt < 2:1752308/76‑1 (MQ=255) gacccGAAAAAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCAc < 2:823829/73‑1 (MQ=255) aaCCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACg > 1:1828917/1‑76 (MQ=255) tAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAAt > 2:688969/1‑76 (MQ=255) tAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAAt > 2:970140/1‑76 (MQ=255) aaGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAAtt < 2:269267/76‑1 (MQ=255) aaGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAAtt > 1:675797/1‑76 (MQ=255) aaGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAAtt > 2:1342581/1‑76 (MQ=255) aaGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAAtt > 2:1323898/1‑76 (MQ=255) aaGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTAAAAAATCACGTAAAtt > 2:157922/1‑76 (MQ=255) aaaaaaaGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTc < 2:1179102/74‑1 (MQ=255) aGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTc > 2:54853/1‑76 (MQ=255) gAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCa > 2:145858/1‑76 (MQ=255) aaaaagGGGGCATAATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCa < 1:1689131/75‑1 (MQ=255) aaaagGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCaa < 1:1554684/76‑1 (MQ=255) aaaaaGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCaa < 2:1863332/76‑1 (MQ=255) aaagGGGGCATAATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAAc < 1:1226481/76‑1 (MQ=255) aaaGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACa > 2:1425021/1‑76 (MQ=255) aaaGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACa > 2:672490/1‑76 (MQ=255) aaaGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACa > 2:1892635/1‑76 (MQ=255) aaaGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACa > 1:114687/1‑76 (MQ=255) aaaGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATAACGTAAATTCAACa > 1:115671/1‑76 (MQ=255) aaGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACat > 2:818423/1‑76 (MQ=255) aaGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACat > 2:26789/1‑76 (MQ=255) aaGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACat > 2:1791827/1‑76 (MQ=255) aGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACata > 2:559846/1‑76 (MQ=255) aGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACata > 2:131315/1‑76 (MQ=255) ggggCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACatat < 2:1904132/76‑1 (MQ=255) cATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACATATTGCa < 1:1713424/76‑1 (MQ=255) cATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACATATTGCa < 1:99742/76‑1 (MQ=255) tGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACATATTGCaaa < 2:773418/76‑1 (MQ=255) tGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACATATTGCaaa < 2:1773059/76‑1 (MQ=255) gATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACATATTGCaaaa < 1:1797380/76‑1 (MQ=255) gATAACCAGGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACATATTGCaaaa < 1:454157/76‑1 (MQ=255) | CAGGCAGTTATTCGTCATCCCCAATATGGCAATGTGGCTTGTATCCCTGAACCGTAAGAAAAAGGGGCATGATAATCATGCCCCACAGCGTGTTGAGAAAGTACGCTTTATCCTACAAAATCACGTAAATTCAACATATTGCAAAA > REL606/671255‑671400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |