| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 4,201,809 | Δ3,666 bp | [iclR]–[metH] | [iclR], [metH] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 4201809 | 4205474 | 3666 | 51 [1] | [1] 50 | [iclR]–[metH] | [iclR],[metH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 4201808 | 1 (0.020) | 46 (1.050) | 37/130 | 0.2 | 98.0% | coding (752/825 nt) | iclR | DNA‑binding transcriptional repressor |
| ? | REL606 | 4205475 = | 1 (0.020) | coding (2717/3684 nt) | metH | B12‑dependent methionine synthase | |||||
CAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4201726‑4201808‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcacgcTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCGGTGGCGCACCGTCTC > REL606/4205475‑4205545 CAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTC > 1:313879/1‑75 AAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTC < 2:1097446/75‑1 AAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCA < 2:1075785/75‑1 AGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACG > 1:1248025/1‑75 GTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGC < 1:622814/75‑1 CAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTG < 1:947884/75‑1 CAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTG > 1:19294/1‑75 GCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAG < 1:1435768/75‑1 CATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGC < 2:831244/75‑1 ATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCG < 2:436237/75‑1 TTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGG > 2:1385990/1‑75 TTCCACCGTACGCCAGCATCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGG > 1:222135/1‑75 TCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGC < 2:223340/75‑1 CGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCG > 2:742698/1‑75 GTACGCCAGCGTCTCTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGA < 1:825567/75‑1 GTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGA < 1:132443/75‑1 TACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGAT > 2:1080959/1‑75 ACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATA > 1:268942/1‑75 ACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATA < 1:540270/75‑1 ACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATA < 2:520825/75‑1 CGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAA < 1:88313/75‑1 CCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACG > 1:398988/1‑75 GTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTC < 2:1248024/75‑1 ACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCT > 2:1453976/1‑75 ACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCT > 1:1475582/1‑75 CTTCCTTCGCCGCTTTAATCACCAGTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTT < 1:474245/75‑1 TCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTT < 1:94733/75‑1 TCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTT < 2:409492/75‑1 TTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGAC > 2:335688/1‑75 TCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACT > 2:28385/1‑75 CGCCGCTTTAATCACTATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTG < 2:1035222/75‑1 CGCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCA > 1:1145046/1‑75 GCTTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAG > 2:779511/1‑75 TTTAATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGC < 2:154018/75‑1 AATCCCCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTA < 1:894407/75‑1 AATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGGTTA > 2:774854/1‑75 ATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTAC < 2:1424347/75‑1 ATCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTAC < 2:1478991/75‑1 TCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACA < 1:424124/75‑1 TCACCATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACA < 1:1612143/75‑1 CATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCC < 2:593793/75‑1 CATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCC < 1:1018411/75‑1 CATTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCC < 2:858845/75‑1 TTGCGCCAATCTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGC < 2:1545215/75‑1 TTGCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGC > 1:1511767/1‑75 GCGCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCG < 2:33173/75‑1 GCCAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCGGT < 2:1024485/75‑1 CAAACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCGGTGG < 1:1073417/75‑1 AACTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACCCCGCCGGGGGCG > 2:1274024/1‑75 CTCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCGGGGGCGCA > 1:1431209/1‑75 TCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCGGTGGGGCAC > 2:758188/1‑75 GGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCGGTGGCGCACCG < 1:801250/75‑1 GGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACGGGCAGGCTTACACGCCGCCGGTGGCGCACCG < 1:801236/75‑1 ACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCGGTGGGGCACCGTCTC > 2:794840/1‑75 CAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATCACCATTGCGCCAAACTCGGTCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4201726‑4201808‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcacgcTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCGGTGGCGCACCGTCTC > REL606/4205475‑4205545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |