| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2038560 | 72 (1.230) | 13 (0.260) | 5/126 | 5.9 | 21.1% | coding (389/822 nt) | wbbB | putative glycosyltransferase WbbB |
| ? | REL606 | = 2039125 | 37 (0.750) | coding (570/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
AAGTATCAAAAATAATTTGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTT > REL606/2039050‑2039198 | aagtaTCAAAAATAATTTGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTc < 2:316582/76‑1 (MQ=255) aaaTCAAAAATAATTTGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCat > 2:1192240/3‑76 (MQ=255) taTCAAAAATAATTTGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCaac < 2:1321554/76‑3 (MQ=255) aTCAAAAATAATTTGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCataa > 2:1841436/1‑76 (MQ=255) ataatTTGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGt < 2:1810089/76‑1 (MQ=255) taatTTGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGtt < 1:356773/76‑1 (MQ=255) taatTTGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGtt < 1:356751/76‑1 (MQ=255) aatTTGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTg < 1:1722820/76‑1 (MQ=255) tttGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGca > 2:265379/1‑76 (MQ=255) aTCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTa > 1:237993/1‑76 (MQ=255) tCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTAc < 1:1241615/76‑1 (MQ=255) tAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTg > 2:441180/1‑76 (MQ=255) gCTAAGTGTGGAATGATGTGTGTCCTAGCAAAAGCCCGGGCTTTCATAATAGATGTTGCACATGTACTTGGTGCTa < 2:177357/76‑1 (MQ=255) tAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTAtt > 1:681353/1‑76 (MQ=255) tAATGTTAGAATTATGTGTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTAtt < 2:1214190/76‑1 (MQ=255) tAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCaa > 1:793929/1‑76 (MQ=255) aGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAAt > 1:715902/1‑76 (MQ=255) aGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAAt < 2:575843/76‑1 (MQ=255) ttattTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCt > 2:1169756/1‑76 (MQ=255) tttttGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACt < 1:456761/76‑1 (MQ=255) ttGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTccc > 1:1371702/1‑76 (MQ=255) tGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCa > 1:164695/1‑76 (MQ=255) gTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAg < 1:625004/76‑1 (MQ=255) gTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAg < 1:1163342/76‑1 (MQ=255) gTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAg < 2:1534691/76‑1 (MQ=255) cTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAAt < 1:539289/76‑1 (MQ=255) tATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATa < 2:699110/76‑1 (MQ=255) tCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATaaa < 1:329229/76‑1 (MQ=255) cAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATaaaa < 1:859404/76‑1 (MQ=255) cAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATaaaa < 1:859376/76‑1 (MQ=255) aaaaaCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAAt > 1:392928/1‑76 (MQ=255) aaaaaCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAAt < 2:309652/76‑1 (MQ=255) aaaaaCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAAt < 1:1403523/76‑1 (MQ=255) aaaaaCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAAt > 2:993255/1‑76 (MQ=255) aaaCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATAc < 1:1246868/76‑1 (MQ=255) aaCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACa < 2:1833215/76‑1 (MQ=255) aaCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACa < 1:272887/76‑1 (MQ=255) aCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACaa < 2:386666/76‑1 (MQ=255) aCCCTCGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCACCATAAAAAACaa > 2:1731503/1‑76 (MQ=255) cccTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAAt < 1:912056/76‑1 (MQ=255) ccTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATa < 1:1677275/76‑1 (MQ=255) tttCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGttttt < 2:726793/76‑1 (MQ=255) ttCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCCCCATAACATACACTCAtttttt > 1:1849918/1‑76 (MQ=255) ttCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGattttt > 2:1849918/1‑76 (MQ=255) | AAGTATCAAAAATAATTTGTAATCGTAAATAGCTAATTTTAGAATTATTTTTGTCCTATCAAAAACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTT > REL606/2039050‑2039198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |