| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2299029 = | 6 (0.100) | 59 (1.010) | 46/150 | 0.2 | 90.8% | coding (54/1359 nt) | glpT | sn‑glycerol‑3‑phosphate transporter |
| ? | REL606 | = 2299035 | NA (NA) | coding (48/1359 nt) | glpT | sn‑glycerol‑3‑phosphate transporter | |||||
GTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTTAT > REL606/2298960‑2299110 | gTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCcgcg < 1:1461222/76‑1 (MQ=255)gTAAGCCGCATAGCCAAAGAAGATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCcgcg < 2:153893/76‑1 (MQ=255) catagccaaagaatatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCgg > 2:89044‑M1/69‑76 (MQ=255) atagccaatgaatatccacaggaaaatttgccagcgcaagcgacgataagtcggatcgatctccgcgCTCCGCGGc > 2:148397‑M1/68‑76 (MQ=255) atagccaaagaatatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGc > 1:1645129‑M1/68‑76 (MQ=255) tagccaaagaatatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCa > 2:1212029‑M1/67‑76 (MQ=255) agccaaagaatatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAg > 1:1193181‑M1/66‑76 (MQ=255) gccaaagaatatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAgg > 2:367954‑M1/65‑76 (MQ=255) aagaatatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAg < 2:1454586‑M1/16‑1 (MQ=255) aagaatatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAg < 1:994585‑M1/16‑1 (MQ=255) agaatatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAgc > 2:1620626‑M1/60‑76 (MQ=255) agaatatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAgc < 1:228769‑M1/17‑1 (MQ=255) tatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAgcgcgc < 2:1376‑M1/21‑1 (MQ=255) tatccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGGAAgcgcgc < 1:1155588‑M1/21‑1 (MQ=255) tccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCtt > 2:1592451‑M1/54‑76 (MQ=255) ccccaggaaaatttgccagcgcgagcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCttt > 2:751271‑M1/53‑76 (MQ=255) ccccaggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCttt > 2:179340‑M1/53‑76 (MQ=255) caggaaaatttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTtgtg < 2:1606996‑M1/27‑1 (MQ=255) ggaaaagttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTtgtgtg > 1:1742441‑M1/48‑76 (MQ=255) atttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCt < 1:448271‑M1/34‑1 (MQ=255) tttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTg > 2:988507‑M1/42‑76 (MQ=255) tttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTg > 1:1762704‑M1/42‑76 (MQ=255) tttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGAAGGCGGGCTTTGTgtggcgttg < 2:315687‑M1/35‑4 (MQ=255) ttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTgg < 1:1405049‑M1/36‑1 (MQ=255) ttgccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTgg < 2:1525606‑M1/36‑1 (MQ=255) gccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGtt > 1:916857‑M1/39‑76 (MQ=255) cccgcgcaatcatcgataagtcgcatcgctctccgcgCGCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGttt > 2:973831‑M1/38‑76 (MQ=255) ccagcgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGttt > 1:1298144‑M1/38‑76 (MQ=255) gtgaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTaaaa > 2:1158443‑M1/34‑76 (MQ=255) cgcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTaaaa > 2:988219‑M1/34‑76 (MQ=255) gcaatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTaaaaa < 1:352724‑M1/44‑1 (MQ=255) caatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAAt < 1:335020‑M1/45‑1 (MQ=255) aatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATa > 2:1487203‑M1/31‑76 (MQ=255) aatcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATa < 2:1385631‑M1/46‑1 (MQ=255) tcgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACt > 2:1818567‑M1/29‑76 (MQ=255) cgacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTc < 1:1494489‑M1/49‑1 (MQ=255) gacgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGGTTAAAAATACTCa < 1:579506‑M1/50‑1 (MQ=255) cgataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGGGGCGCTGGGTTAAAAATACTCAAc < 2:46238‑M1/52‑1 (MQ=255) gataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACa > 1:1841240‑M1/24‑76 (MQ=255) gataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACa < 2:356599‑M1/53‑1 (MQ=255) ataagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACAt > 2:1780986‑M1/23‑76 (MQ=255) taagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACAtt > 1:994190‑M1/22‑76 (MQ=255) aagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTg < 2:1851164‑M1/56‑1 (MQ=255) aagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTg < 2:59526‑M1/56‑1 (MQ=255) aagtcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTg < 1:547905‑M1/56‑1 (MQ=255) tcggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATa < 1:1001210‑M1/59‑1 (MQ=255) cggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAg > 2:895116‑M1/17‑76 (MQ=255) cggatcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAg > 2:1526272‑M1/17‑76 (MQ=255) atcgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCt < 2:172026‑M1/63‑1 (MQ=255) cgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTcc > 2:1678692‑M1/12‑76 (MQ=255) cgatctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGGTTAAAAATACTCAACATTGATAGCCTcc < 1:303663‑M1/65‑1 (MQ=255) tctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTccgcg < 2:179090‑M1/68‑3 (MQ=255) tctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTg < 2:1543969‑M1/68‑1 (MQ=255) tctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTg > 2:1289797‑M1/9‑76 (MQ=255) ctccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTgg < 2:16865‑M1/69‑1 (MQ=255) ccgcgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGcc < 2:1390870‑M1/71‑1 (MQ=255) cgCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGt > 1:159392‑M1/3‑76 (MQ=255) ctcCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTgg > 1:816593/1‑76 (MQ=255) tcCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGGGGt > 2:664910/1‑76 (MQ=255) gcgGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCtt < 1:703466/76‑1 (MQ=255) gcgGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCtt < 2:895039/76‑1 (MQ=255) ggCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCttat > 2:453945/1‑76 (MQ=255) | GTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAGCGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTTAT > REL606/2298960‑2299110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |