| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3582336 | 64 (0.960) | 5 (0.080) | 4/138 | 8.4 | 7.4% | coding (356/1224 nt) | yhiS | hypothetical protein |
| ? | REL606 | = 3582485 | 66 (1.060) | coding (505/1224 nt) | yhiS | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAG > REL606/3582411‑3582559 | tCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAAtt < 1:869871/75‑1 (MQ=255) cATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAAttt < 2:1412352/75‑1 (MQ=255) cATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAAttt < 1:2003008/75‑1 (MQ=255) cATAAC‑AAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAAtttt < 2:856843/75‑1 (MQ=255) aaCTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAt < 2:1648680/75‑1 (MQ=255) aaaaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCt > 2:1735784/1‑75 (MQ=255) aaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGa < 2:897639/75‑1 (MQ=255) aaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGa > 1:630136/1‑75 (MQ=255) aTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaa > 1:1806671/1‑75 (MQ=255) aTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaa > 1:1806695/1‑75 (MQ=255) ttAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaac < 2:1493815/75‑1 (MQ=255) ttAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaac < 1:2025060/75‑1 (MQ=255) tAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaaca < 1:67382/75‑1 (MQ=255) aGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaacaa < 1:1877957/75‑1 (MQ=255) aGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaacaa < 2:921257/75‑1 (MQ=255) gCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaacaac > 1:1736957/1‑75 (MQ=255) gTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGa > 2:767975/1‑75 (MQ=255) gTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGa < 2:503256/75‑1 (MQ=255) gTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGa > 1:85661/1‑75 (MQ=255) gTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGa < 1:1221440/75‑1 (MQ=255) gTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGa < 1:1221441/75‑1 (MQ=255) tAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAg > 1:1027150/1‑75 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGc > 2:159207/1‑75 (MQ=255) gaagaGGGAATACCCATAACATTCACTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt > 1:950091/1‑75 (MQ=255) gagGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGAc < 1:1367907/75‑1 (MQ=255) gggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACtt < 1:295468/75‑1 (MQ=255) gggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACtt < 2:1791044/75‑1 (MQ=255) gggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACtt < 1:1319587/75‑1 (MQ=255) gggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACtt < 1:1319595/75‑1 (MQ=255) ggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTa < 2:1806837/75‑1 (MQ=255) aaTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTAcc < 2:340403/75‑1 (MQ=255) aTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCa < 2:348597/75‑1 (MQ=255) tACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCaa < 1:1914737/75‑1 (MQ=255) aCCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAAc < 2:1055471/75‑1 (MQ=255) cATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTaa < 1:413876/75‑1 (MQ=255) aTAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAat < 2:168312/75‑1 (MQ=255) aTAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAat < 1:2045136/75‑1 (MQ=255) aTAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAat < 2:853311/75‑1 (MQ=255) tAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAata > 2:1140504/1‑75 (MQ=255) aTTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATaaa > 2:1013962/1‑75 (MQ=255) ttCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATaaaa > 1:970287/1‑75 (MQ=255) tCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAg > 2:268367/1‑75 (MQ=255) aGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGat < 2:1544013/75‑1 (MQ=255) aGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGat < 2:418360/75‑1 (MQ=255) tCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTc < 1:62687/75‑1 (MQ=255) tCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTc < 2:2328/75‑1 (MQ=255) cAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCaa < 1:1422173/75‑1 (MQ=255) aaaCCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCaaa < 2:609290/75‑1 (MQ=255) aaaCCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCaaa < 2:609295/75‑1 (MQ=255) cATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCt > 2:473728/1‑75 (MQ=255) cATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCt > 2:473735/1‑75 (MQ=255) aTGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTg < 1:776946/75‑1 (MQ=255) aTGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTg > 2:1035757/1‑75 (MQ=255) tGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGt > 1:413998/1‑75 (MQ=255) tGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGt > 1:413986/1‑75 (MQ=255) cgTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGt > 2:1546104/2‑75 (MQ=255) gTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTa < 1:1502012/75‑1 (MQ=255) ttttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCGAAGCCTGTAt > 1:131099/1‑75 (MQ=255) ttttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTAt > 1:553956/1‑75 (MQ=255) ttttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTAt > 1:131067/1‑75 (MQ=255) tttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATc < 1:1671087/75‑1 (MQ=255) tttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATc < 1:1671100/75‑1 (MQ=255) tCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCaa < 1:275009/75‑1 (MQ=255) cAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCaaa < 1:89662/75‑1 (MQ=255) aGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCaaaa > 1:450187/1‑75 (MQ=255) gATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCaaaaa > 1:1082081/1‑75 (MQ=255) tACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAAt > 2:2052075/1‑75 (MQ=255) tACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAAt > 1:560898/1‑75 (MQ=255) tACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAAt > 1:1729819/1‑75 (MQ=255) ttttATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGaa > 2:1640520/1‑75 (MQ=255) tttATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAg > 1:347270/1‑75 (MQ=255) | TCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAG > REL606/3582411‑3582559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |