New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2039188 =24 (0.420)6 (0.110) 4/140 6.9 15.1% coding (507/747 nt) wbbA putative glycosyltransferase WbbA
?REL606 2039561 = 45 (0.840)coding (134/747 nt) wbbA putative glycosyltransferase WbbA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2039256‑2039188
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctattTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGG  >  REL606/2039561‑2039634
                                                                                                                                               
CATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATTTGGTCTT                                                                     <  2:690874/76‑1
            TATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAA‑‑GTAAATGCTATTTGGTCTTTATATTTAGATTCT                                                       <  2:1553691/76‑1
            TATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAA‑‑GTAAATGCTATTTGGTCTTTATATTTAGATTCT                                                       <  2:1553711/76‑1
               AGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATTTGGTCTTTATATTTAGATTCTT                                                      <  2:38576/76‑1
               AGTGAATATTATGAACATCTTGAGTCATTAAAAAATAAAAACAAAAAAACTATCTGGTCTTTATATTTAGATTCTT                                                      <  2:38566/76‑1
                      ATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATTTGGTCTTTATATTTAGATTCTTTTATTGT                                               <  2:1346027/76‑1
                                                                   TTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGG  >  1:113820/1‑76
                                                                                                                                               
CATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAACAAAAAAACTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2039256‑2039188
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctattTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGG  >  REL606/2039561‑2039634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.