| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,976,782 | IS150 (+) +3 bp | coding (39‑41/672 nt) | yedW ← | predicted DNA‑binding response regulator in two‑component system with YedV |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 664688 = | NA (NA) | 50 (0.900) | 33/146 | 0.8 | 90.5% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 1976784 | 5 (0.090) | coding (39/672 nt) | yedW | predicted DNA‑binding response regulator in two‑component system with YedV | |||||
| * | ? | REL606 | 1976782 = | 5 (0.090) | 63 (1.100) | 47/150 | 0.2 | 92.4% | coding (41/672 nt) | yedW | predicted DNA‑binding response regulator in two‑component system with YedV |
| ? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
Only 100 of 125 total aligned reads displayed.
AGATAAAGCCCATCTCTGCCATCAGAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCATATGTTATAGAAA > REL606/1976707‑1976857 | aGATAAAGCCCATCTCTGCCATCAGAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACt < 2:457482/76‑1 (MQ=255)aGATAAAGCCCATCTCTGCCATCAGAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACt > 2:1321692/1‑76 (MQ=255) tgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTcc > 1:1197943‑M1/74‑76 (MQ=255) tAAAGCCCATCTCTGCCATCAGAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCt > 1:1421479‑M2/1‑75 (MQ=255) ctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTgg < 2:483026‑M1/6‑1 (MQ=255) tccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTggg < 1:249473‑M1/7‑1 (MQ=255) ccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCtgggc < 2:443470‑M1/8‑2 (MQ=255) ccATCTCTGCCATCAGAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactg > 1:598124‑M2/1‑69 (MQ=255) ccATCTCTGCCATCAGAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactg > 2:1374021‑M2/1‑69 (MQ=255) aattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTcc < 2:183992‑M1/10‑1 (MQ=255) attgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCt < 2:1332657‑M1/11‑1 (MQ=255) aTCTCTGCCATCAGAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgca > 1:1151575‑M2/1‑67 (MQ=255) ctctGCCATCAGAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacc < 2:547994‑M2/76‑12 (MQ=255) tctGCCATCAGAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcaccc > 2:1433470‑M2/1‑64 (MQ=255) atatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGAt < 2:977934‑M1/16‑1 (MQ=255) tatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGAtt < 2:1084148‑M1/17‑1 (MQ=255) tatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGAtt > 1:1050440‑M1/60‑76 (MQ=255) cggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATc < 1:462800‑M1/20‑1 (MQ=255) atcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCa < 2:974198‑M1/24‑1 (MQ=255) atcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCa > 2:974274‑M1/53‑76 (MQ=255) tcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCaa > 1:1097475‑M1/52‑76 (MQ=255) gAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttgg < 2:525612‑M2/76‑23 (MQ=255) cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAAt > 2:658156‑M1/51‑76 (MQ=255) cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAAt < 1:1712659‑M1/26‑1 (MQ=255) cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAAt < 1:1660291‑M1/26‑1 (MQ=255) agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATa > 2:1649253‑M1/50‑76 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATaa > 2:1292562‑M1/49‑76 (MQ=255) aCGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacg > 1:1071722‑M2/1‑51 (MQ=255) ggCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgat < 1:1480072‑M2/76‑28 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTa < 2:1483503‑M1/31‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTaa > 1:1222121‑M1/45‑76 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTaa > 2:1139063‑M1/45‑76 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCATCAATAAGTaa > 2:1139048‑M1/45‑76 (MQ=255) aTCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaa > 1:150388‑M2/1‑46 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtataTCCTGGGTCCTTTGATTATCTTCAATAAGTaaaa > 2:1756620‑M1/43‑76 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTaaaa < 1:224262‑M1/34‑1 (MQ=255) cAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaat > 2:710180‑M2/1‑44 (MQ=255) cAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaat > 1:1794264‑M2/1‑44 (MQ=255) aaTGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatg > 2:1233819‑M2/1‑43 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCt > 2:147378‑M1/40‑76 (MQ=255) aCATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCa > 2:963132/1‑76 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCAt < 2:877900‑M1/41‑1 (MQ=255) cATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaata > 2:771032‑M2/1‑38 (MQ=255) cATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaata < 1:887578‑M2/76‑39 (MQ=255) aTAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatag < 1:1097569‑M2/76‑40 (MQ=255) aTAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatag > 1:786787‑M2/1‑37 (MQ=255) aTAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatag < 1:1164362‑M2/76‑40 (MQ=255) tgtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGa < 1:1503300‑M1/43‑1 (MQ=255) tAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagc < 2:400372‑M2/76‑41 (MQ=255) tAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagc < 2:843257‑M2/76‑41 (MQ=255) gtttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGaa < 1:1127565‑M1/44‑1 (MQ=255) tttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGaaa > 1:1027683‑M1/32‑76 (MQ=255) tttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGaaa < 1:735876‑M1/45‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGaaaa > 1:1497854‑M1/31‑76 (MQ=255) ttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGaaaa > 2:1779593‑M1/31‑76 (MQ=255) ttaactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGaaaa > 2:862194‑M1/31‑76 (MQ=255) taactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAaat < 1:1608169‑M1/47‑1 (MQ=255) ccGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccct < 2:1064052‑M2/76‑45 (MQ=255) ccGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:473858‑M2/76‑45 (MQ=255) ccGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccct > 2:1079289‑M2/1‑32 (MQ=255) cGCTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:1057484‑M2/1‑31 (MQ=255) aactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAaata > 2:1316404‑M1/29‑76 (MQ=255) aactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAaata > 2:1585518‑M1/29‑76 (MQ=255) aactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAaata < 1:145260‑M1/48‑1 (MQ=255) aactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAaata > 2:1245869‑M1/29‑76 (MQ=255) aactgtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAaata > 2:1204180‑M1/29‑76 (MQ=255) cTTCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:1244322‑M2/1‑29 (MQ=255) tCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 1:265042‑M2/76‑50 (MQ=255) tCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:424657‑M2/1‑27 (MQ=255) tCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 2:1258576‑M2/76‑50 (MQ=255) tCGGAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatgcaatagcccctaatat > 1:1568594‑M2/1‑27 (MQ=255) gtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAatat > 2:55107‑M1/25‑76 (MQ=255) gtccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAatat > 2:55081‑M1/25‑76 (MQ=255) tccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATg < 1:1048601‑M1/53‑1 (MQ=255) tccaactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATg > 1:252488‑M1/24‑76 (MQ=255) ggAAAGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgt > 2:1626421‑M2/1‑25 (MQ=255) aactttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCa > 2:1086040‑M1/21‑76 (MQ=255) aaGCCCCTGCGTTTCCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa < 2:1803348‑M2/76‑55 (MQ=255) aaGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa > 1:1610322‑M2/1‑22 (MQ=255) aaGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa < 1:805718‑M2/76‑55 (MQ=255) aaGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa < 1:204120‑M2/76‑55 (MQ=255) aGCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa < 2:1681366‑M2/76‑56 (MQ=255) tttttggggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATaa > 1:1631241‑M1/18‑76 (MQ=255) gCCCCTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag > 2:781031‑M2/1‑20 (MQ=255) cccTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc > 1:1754201‑M2/1‑18 (MQ=255) ccTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcca < 2:1314156‑M2/76‑60 (MQ=255) ccTGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcca < 2:1314139‑M2/76‑60 (MQ=255) tGCGTTACCCACTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaa < 1:1177871‑M2/76‑62 (MQ=255) tGCGTTACCCACTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAAACat < 1:79233/76‑1 (MQ=255) ggtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCatat < 1:1223659‑M1/66‑1 (MQ=255) gtcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCATATg > 2:1472091‑M1/10‑76 (MQ=255) tcagtacaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCATATGt > 2:807815‑M1/9‑76 (MQ=255) cACTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCATATGTTATAg < 2:1364444/76‑1 (MQ=255) acaTCCTGGGTCCTTTGATTATCTTNAATAAGTAAAATCTTCATGNAAATAATATGCCATAAATCATATGTTATAg < 2:108252‑M1/73‑1 (MQ=255) acaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCATATGTTATAg > 1:443470‑M1/4‑76 (MQ=255) acaTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCATATGTTATAg < 1:53686‑M1/73‑1 (MQ=255) aCTCCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt > 1:1229457‑M2/1‑5 (MQ=255) aTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCATATGTTATAGaa > 1:394355‑M1/2‑76 (MQ=255) aTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCATATGTTATAGaa < 2:1115933‑M1/75‑1 (MQ=255) tCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCATATGTTATAGaaa < 1:1454729/76‑1 (MQ=255) | AGATAAAGCCCATCTCTGCCATCAGAAACGGCATCAATGACATAACCCGCTTCGGAAAGCCCCTGCGTTACCCACTCCTGGGTCCTTTGATTATCTTCAATAAGTAAAATCTTCATGAAAATAATATGCCATAAATCATATGTTATAGAAA > REL606/1976707‑1976857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |