| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2039596 | 42 (0.730) | 5 (0.100) | 4/130 | 6.5 | 11.5% | coding (99/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | = 2039906 | 41 (0.830) | coding (223/438 nt) | vioB | VioB, involved in dTDP‑N‑acetylviosamine synthesis | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGC > REL606/2039522‑2039671 | aCGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATaa < 1:854115/76‑1 (MQ=255)aCGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATaa < 1:1708765/76‑1 (MQ=255) ttAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGAtt < 2:1536941/76‑1 (MQ=255) aaTAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCa > 1:375183/1‑76 (MQ=255) aGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTa > 2:1089172/1‑76 (MQ=255) tAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTaaa < 1:692121/76‑1 (MQ=255) tAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTaaa < 2:1656434/76‑1 (MQ=255) gCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTACACCACt > 2:1431313/1‑76 (MQ=255) gCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACt < 2:162782/76‑1 (MQ=255) gCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACt > 2:177267/1‑76 (MQ=255) gCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACt > 2:967220/1‑76 (MQ=255) gCTATTTGGTCTTTATATTTAGATTCTTTTATTCTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACt < 2:162765/76‑1 (MQ=255) tttGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAgg > 1:113820/1‑76 (MQ=255) gtGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGc > 2:1632434/2‑76 (MQ=255) tGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGcc > 1:1505783/1‑76 (MQ=255) tGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGcc > 1:272550/1‑76 (MQ=255) tGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGcc > 1:272572/1‑76 (MQ=255) ggTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCg > 1:1142367/1‑76 (MQ=255) gTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGa > 1:1679939/1‑76 (MQ=255) tttATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGatta > 1:165538/1‑76 (MQ=255) tttATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGatta > 1:165539/1‑76 (MQ=255) tataTTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACACAGGCCGattatt > 1:322214/1‑76 (MQ=255) atTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTAttttt > 1:792532/1‑76 (MQ=255) atTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTAttttt < 1:1703881/76‑1 (MQ=255) tttAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTa > 1:1169884/1‑76 (MQ=255) tttAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTa < 2:1716426/76‑1 (MQ=255) ttAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAg > 1:965073/1‑76 (MQ=255) ttAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAg > 1:85641/1‑76 (MQ=255) ttAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAg > 1:396460/1‑76 (MQ=255) tAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGt > 1:763341/1‑76 (MQ=255) tAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGt > 1:763318/1‑76 (MQ=255) tAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGt > 2:389103/1‑76 (MQ=255) aGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGtt < 1:293096/76‑1 (MQ=255) aGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGtt > 1:894853/1‑76 (MQ=255) ttttATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGa > 1:1766302/1‑76 (MQ=255) ttttATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGa > 1:1650769/1‑76 (MQ=255) ttGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAat > 2:1348809/1‑76 (MQ=255) tGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAata < 2:1659261/76‑1 (MQ=255) tGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAata < 1:1496018/76‑1 (MQ=255) ataAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTAt < 2:1592799/76‑1 (MQ=255) taAGATTTATAAAACAATTTGCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATg < 1:565841/76‑1 (MQ=255) aaGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGc > 2:1563440/1‑76 (MQ=255) | ACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGC > REL606/2039522‑2039671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |