| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2039335 = | 31 (0.540) | 5 (0.100) | 4/138 | 6.8 | 12.4% | coding (360/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | 2039563 = | 42 (0.800) | coding (132/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGA > REL606/2039488‑2039638 | ttCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTgg > 1:1422665/1‑76 (MQ=255) tCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGt < 2:238950/76‑1 (MQ=255) tCAAAGTGTTAATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGt < 1:717131/76‑1 (MQ=255) aaaGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCt > 2:692121/1‑76 (MQ=255) aaGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCtt < 1:690874/76‑1 (MQ=255) gATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATAttt < 1:1375529/76‑1 (MQ=255) gATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATAttt < 1:390770/76‑1 (MQ=255) gATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATAttt < 1:390766/76‑1 (MQ=255) ataACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGa < 2:1128325/76‑1 (MQ=255) ataACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGa < 1:184191/76‑1 (MQ=255) ataACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGa < 1:1716571/76‑1 (MQ=255) aaCGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGAtt < 2:71850/76‑1 (MQ=255) aaCGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGAtt < 1:788978/76‑1 (MQ=255) aaCGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGAtt < 1:1610342/76‑1 (MQ=255) cGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCt < 1:60581/76‑1 (MQ=255) cGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCt > 1:1771173/1‑76 (MQ=255) cGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCt < 1:1817078/76‑1 (MQ=255) cGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCt < 1:1553711/76‑1 (MQ=255) cGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCt < 1:1553691/76‑1 (MQ=255) ggATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCtt < 1:38576/76‑1 (MQ=255) gATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCttt < 1:799965/76‑1 (MQ=255) gATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCttt > 1:53371/1‑76 (MQ=255) gATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCttt < 1:1384582/76‑1 (MQ=255) gATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCttt < 2:1530675/76‑1 (MQ=255) cTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTAt < 2:1313749/76‑1 (MQ=255) cTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTAt < 1:1538952/76‑1 (MQ=255) aaGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTg < 1:1672686/76‑1 (MQ=255) aGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGt < 1:1346027/76‑1 (MQ=255) ggAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTa < 1:1238026/76‑1 (MQ=255) gCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTta > 1:1630355/1‑76 (MQ=255) aCGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATaa < 1:1708765/76‑1 (MQ=255) aCGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATaa < 1:854115/76‑1 (MQ=255) ttAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGAtt < 2:1536941/76‑1 (MQ=255) aaTAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCa > 1:375183/1‑76 (MQ=255) aGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTa > 2:1089172/1‑76 (MQ=255) tAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTaaa < 1:692121/76‑1 (MQ=255) tAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTaaa < 2:1656434/76‑1 (MQ=255) gCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTACACCACt > 2:1431313/1‑76 (MQ=255) gCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACt > 2:967220/1‑76 (MQ=255) gCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACt < 2:162782/76‑1 (MQ=255) gCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACt > 2:177267/1‑76 (MQ=255) gCTATTTGGTCTTTATATTTAGATTCTTTTATTCTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACt < 2:162765/76‑1 (MQ=255) tttGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAgg > 1:113820/1‑76 (MQ=255) gtGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGc > 2:1632434/2‑76 (MQ=255) tGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGcc > 1:272572/1‑76 (MQ=255) tGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGcc > 1:272550/1‑76 (MQ=255) tGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGcc > 1:1505783/1‑76 (MQ=255) ggTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCg > 1:1142367/1‑76 (MQ=255) gTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGa > 1:1679939/1‑76 (MQ=255) | TTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCCGA > REL606/2039488‑2039638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |