| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2678913 | 87 (1.340) | 7 (0.120) | 4/132 | 7.4 | 8.9% | intergenic (+267/‑16) | ECB_02509/ECB_02510 | Fels‑2 prophage protein/Recombinase |
| ? | REL606 | = 2679078 | 67 (1.180) | coding (150/1557 nt) | ECB_02510 | Recombinase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TATTCTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGTAGAACAA > REL606/2679004‑2679153 | tatTCTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACg < 1:480496/76‑1 (MQ=255)tatTCTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACg < 1:1765184/76‑1 (MQ=255)tatTCTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACg < 1:1765161/76‑1 (MQ=255) ttCTTTACATATTCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACgat > 1:1031319/1‑76 (MQ=255) ttCTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACgat > 1:1414123/1‑76 (MQ=255) ttCTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACgat > 1:1543733/1‑76 (MQ=255) tCTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACgatg > 1:1058704/1‑76 (MQ=255) tCTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACgatg > 2:1995100/1‑76 (MQ=255) cTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACgatga > 2:1996499/1‑76 (MQ=255) cTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACgatga > 1:455588/1‑76 (MQ=255) cATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAg > 1:2020175/1‑76 (MQ=255) aTAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAgg > 2:1005416/1‑76 (MQ=255) aTAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAgg < 1:1681542/76‑1 (MQ=255) tCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAag > 2:903206/1‑76 (MQ=255) cAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAaga > 1:500129/1‑76 (MQ=255) cAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAaga < 1:25711/76‑1 (MQ=255) ccGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCgg > 1:785291/1‑76 (MQ=255) ccGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCgg > 1:785272/1‑76 (MQ=255) cGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGa < 2:120456/76‑1 (MQ=255) cGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGa < 1:1742195/76‑1 (MQ=255) cGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGa < 2:229723/76‑1 (MQ=255) cGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGa > 1:483919/1‑76 (MQ=255) tatatCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCa < 1:773461/76‑1 (MQ=255) tatatCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCa > 2:516738/1‑76 (MQ=255) atatCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAg < 1:1827086/76‑1 (MQ=255) atatCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAg < 1:1827112/76‑1 (MQ=255) tatCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGt > 1:111355/1‑76 (MQ=255) tCAAAGACTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTAt < 2:1838667/76‑1 (MQ=255) cAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATc > 2:1852947/1‑76 (MQ=255) cAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATc > 1:675510/1‑76 (MQ=255) cAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATc > 1:1647482/1‑76 (MQ=255) aaGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGt < 2:121862/76‑1 (MQ=255) aGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTa > 2:1246668/1‑76 (MQ=255) gATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTag > 1:1162469/1‑76 (MQ=255) gATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTag > 1:2023207/1‑76 (MQ=255) aTTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTagg > 2:1719352/1‑76 (MQ=255) gCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTaggcaggc < 1:1978988/76‑1 (MQ=255) tGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCAt > 1:1016776/1‑76 (MQ=255) tGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCAt > 1:1613416/1‑76 (MQ=255) gAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCAtt > 1:984480/1‑76 (MQ=255) gAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCAtt < 1:1135180/76‑1 (MQ=255) gAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCAtt > 2:458214/1‑76 (MQ=255) aaaaGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTc > 1:413899/1‑76 (MQ=255) aGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCttt < 2:1654206/76‑1 (MQ=255) aGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCttt < 2:158399/76‑1 (MQ=255) gAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTg > 2:612437/1‑76 (MQ=255) aaCAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTgc < 2:1071357/76‑1 (MQ=255) aCAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTgca > 2:233459/1‑76 (MQ=255) cAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTgcag > 2:550702/1‑76 (MQ=255) cAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTgata < 2:111355/76‑4 (MQ=255) tatGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGcagcag < 1:1481438/76‑1 (MQ=255) atGGAAATCGCTTATACCTACGGTGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGt > 2:378701/1‑76 (MQ=255) ggAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTa < 2:496766/76‑1 (MQ=255) gAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTAc > 2:429229/1‑76 (MQ=255) aaaTCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACt < 1:158250/76‑1 (MQ=255) aaTCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACtt < 2:578517/76‑1 (MQ=255) aaTCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACtt < 2:365535/76‑1 (MQ=255) aaTCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACtt < 1:477339/76‑1 (MQ=255) aaTCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACtt < 1:1192135/76‑1 (MQ=255) tCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAg > 2:1210895/1‑76 (MQ=255) tCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAg > 1:1507343/1‑76 (MQ=255) tCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAg > 1:1507347/1‑76 (MQ=255) ttATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGAt > 2:1030728/1‑76 (MQ=255) tataCCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTTCTTAGCGATg > 2:1939297/1‑76 (MQ=255) ataCCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTTTTTGCAGTAGTTACTTAGCGATGt > 2:1562436/1‑76 (MQ=255) ataCCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTa > 1:107122/1‑65 (MQ=255) ataCCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTa < 2:107122/65‑1 (MQ=255) ataCCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGt > 1:1297430/1‑76 (MQ=255) ataCCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGt > 1:4176/1‑76 (MQ=255) ataCCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGt > 2:1562415/1‑76 (MQ=255) aCCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGTAg > 1:266275/1‑76 (MQ=255) aCCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGTAg > 1:1382589/1‑76 (MQ=255) aCCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGTAg < 2:1523924/76‑1 (MQ=255) ccTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGTAGa < 2:1632794/76‑1 (MQ=255) cTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGTAGaa > 2:1964198/1‑76 (MQ=255) tACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGTAGAAc > 2:1035751/1‑76 (MQ=255) cGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGTAGAACaa < 2:1500517/76‑1 (MQ=255) | TATTCTTTACATAATCAGTCCGAATATATCAAAGATTATGCTGAAAAGAACAATATGGAAATCGCTTATACCTACGATGATTCAGGTAAGAGCGGAGTCAGTATCGTAGGCAGGCATTCTTTGCAGCAGTTACTTAGCGATGTAGAACAA > REL606/2679004‑2679153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |