| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3022508 = | 59 (1.010) | 10 (0.200) | 5/126 | 5.6 | 14.0% | coding (177/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | 3023074 = | 73 (1.480) | intergenic (‑390/+184) | ECB_02821/ECB_02822 | hypothetical protein/bifunctional Ribulose 5‑phosphate reductase/CDP‑ribitol pyrophosphorylase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTAATAACAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3022593‑3022508‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aataaacataatTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAATC > REL606/3023074‑3023148 TTAATAACAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAA < 1:1064448/76‑1TTAATAACAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAA < 1:1210595/76‑1TTAATAACAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAA > 1:1872810/1‑76 ATAACAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAA > 2:1516898/1‑76 ATAACAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAA > 2:1406037/1‑76 TAACAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAA < 2:231406/76‑1 TAACAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAA < 1:888387/76‑1 TAACAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAA < 1:888386/76‑1 CAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACAT < 1:343987/76‑1 CAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACAT > 1:1857172/1‑76 AAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATA < 1:715222/76‑1 ATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAATTTAAATA < 2:1166463/76‑1 ATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAATTTAAATA < 2:1166487/76‑1 TAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAATTTAAATAAG < 2:1094631/76‑1 TAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAATTTAAATAAG < 2:1094647/76‑1 TAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAATTTAAATAAG < 2:1094669/76‑1 TAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAATTTAAATAAGGTAGAAGCATAA < 2:488184/76‑1 TATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAATTTAAATAAGGTAGTAGCATAATGAA < 2:242568/76‑1 TATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAATTTAAATAAGGTAGTAGCATAATGAA < 2:242566/76‑1 AGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAATATAAATAAGGTAGTAGCATAATGAAATTTATA < 2:16380/76‑1 AGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAATATAAATAAGGTAGTAGCATAATGAAATTTATA < 2:1378010/76‑1 AATAAACATAATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTT < 2:471401/76‑1 ATAAACATAATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTA > 2:1278243/1‑76 AAACATAATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAAT > 2:937551/1‑76 AACATAATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATG < 2:954588/76‑1 AACATAATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATG > 2:1244063/1‑76 ATAATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATT < 1:1244063/76‑1 ATAATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATT < 2:946233/76‑1 AATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAA < 1:1004482/76‑1 AATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAA > 2:372026/1‑76 AATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAA < 1:866954/76‑1 AATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAA < 2:927247/76‑1 AATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAA < 1:1004497/76‑1 ATTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAAT > 2:722479/1‑76 TTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAATC > 2:1389877/1‑76 TTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAATC > 2:1389854/1‑76 TTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAATC < 1:742994/76‑1 TTAATAACAAGGATTGTATTAGTGTTTTTTGTAAATATTATAAGGAAATAGAACATTTAGCTGTCGAGGTATTTAATAAACATAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3022593‑3022508‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aataaacataatTTAAATAAGGTAGTAGCATAATGAAATTTATAGTACTAATCATTTTTGTTTACTTATTAACTTTAATGATTAATC > REL606/3023074‑3023148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |