| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2038432 = | 65 (1.110) | 16 (0.310) | 6/134 | 5.4 | 21.6% | coding (517/822 nt) | wbbB | putative glycosyltransferase WbbB |
| ? | REL606 | 2038941 = | 58 (1.110) | coding (8/822 nt) | wbbB | putative glycosyltransferase WbbB | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAA > REL606/2038359‑2038506 | cTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaa < 1:459849/76‑1 (MQ=255) cGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaaaaa < 1:1760961/76‑1 (MQ=255) cGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaaaaa > 2:1636797/1‑76 (MQ=255) cGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaaaaa > 2:1636777/1‑76 (MQ=255) cGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaaaaa < 1:1760950/76‑1 (MQ=255) gAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaaaaaa < 1:797890/76‑1 (MQ=255) aTAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAat > 1:1433818/1‑76 (MQ=255) aTAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAat < 1:710071/76‑1 (MQ=255) tAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAata < 1:1081553/76‑1 (MQ=255) aaaTTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAatat < 1:1371420/76‑1 (MQ=255) aTTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATAttt < 1:1379444/76‑1 (MQ=255) ctctcAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTgg > 1:1061097/1‑76 (MQ=255) ctctcAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTgg > 1:1061077/1‑76 (MQ=255) tcAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAg < 1:790179/76‑1 (MQ=255) tcAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAg > 1:1870491/1‑76 (MQ=255) tcAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAg > 1:1870505/1‑76 (MQ=255) tcAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAg > 1:1870508/1‑76 (MQ=255) tcAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAg > 1:1870527/1‑76 (MQ=255) cAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGc > 2:1320226/1‑76 (MQ=255) cTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCAt < 1:333121/76‑1 (MQ=255) cTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCAt < 1:20582/76‑1 (MQ=255) cTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCAt < 1:20564/76‑1 (MQ=255) cTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAACCTCAt < 1:20581/76‑1 (MQ=255) ttGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCAtt < 2:1559534/76‑1 (MQ=255) ttGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCAtt > 1:90200/1‑76 (MQ=255) tGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTg > 1:629364/1‑76 (MQ=255) tGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTg > 1:629351/1‑76 (MQ=255) tCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGc < 1:715991/76‑1 (MQ=255) cAATCTGCATTCCCCCTTTGGGGTCAATAATATCTATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCa > 2:31700/1‑76 (MQ=255) cAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCa > 2:31674/1‑76 (MQ=255) cTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTa > 2:807521/1‑76 (MQ=255) gCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAAc < 1:769062/76‑1 (MQ=255) gCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATGTTGGAAGCTCATTGTAGCAACTAAc < 1:1514696/76‑1 (MQ=255) aTTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACaa < 1:411249/76‑1 (MQ=255) aTTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACaa < 1:411252/76‑1 (MQ=255) ttCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAat < 1:1684129/76‑1 (MQ=255) ccATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAattatt < 1:14119/76‑1 (MQ=255) ccATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAattatt > 1:261947/1‑76 (MQ=255) ccATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAattatt > 1:261962/1‑76 (MQ=255) ccATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAattatt > 1:261963/1‑76 (MQ=255) tttGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTAttttt > 1:1881029/1‑76 (MQ=255) tctGGGGCCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTAttttt > 1:1881010/3‑76 (MQ=255) ttGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAACTCTTTTTg > 1:1466110/1‑76 (MQ=255) tGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGc < 1:837339/76‑1 (MQ=255) tGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGc < 1:837328/76‑1 (MQ=255) tGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCACATTGTAGCAACTAACAATTATTTTTGc > 1:407645/1‑76 (MQ=255) ggggTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCa < 1:1089610/76‑1 (MQ=255) ggggTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCa < 1:352867/76‑1 (MQ=255) ggTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGa < 1:1220854/76‑1 (MQ=255) ggTCAATAATATCAATATCATTAATAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGa < 1:1220863/76‑1 (MQ=255) gTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGAt > 2:795872/1‑76 (MQ=255) ataataTCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGAttttt > 1:280778/1‑76 (MQ=255) ataataTCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGAttttt > 1:679508/1‑76 (MQ=255) ataataTCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGAttttt > 1:679504/1‑76 (MQ=255) taataTCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTc > 1:351369/1‑76 (MQ=255) aatatcaatatcATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCa > 1:1789581/1‑76 (MQ=255) tcaatatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATtta > 1:177943/1‑76 (MQ=255) tcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCa > 1:213588/1‑76 (MQ=255) ttACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATAc > 1:1286565/1‑76 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:486100/76‑1 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:889144/76‑1 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:657504/76‑1 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:657486/76‑1 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:486129/76‑1 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:486135/76‑1 (MQ=255) | CTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAA > REL606/2038359‑2038506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |