| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2039076 = | 24 (0.490) | 17 (0.380) | 9/136 | 3.3 | 20.2% | coding (619/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | 2039562 = | 113 (2.560) | coding (133/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
ACCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2039152‑2039076‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctatttGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCC > REL606/2039562‑2039636 ACCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATT > 1:4569/1‑76 CCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTT < 2:1090011/76‑1 CAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTG < 2:968786/76‑1 CAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTG < 2:968777/76‑1 ACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTT < 2:1149378/76‑1 TGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTTTAT < 2:1094415/76‑1 TGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTTTAT < 2:1094436/76‑1 CATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTTTATATTTAGA < 2:1341888/76‑1 TATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTTTATATTTAGATTCT < 2:53728/76‑1 TATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTGCTCTTTATATTTAGATTCT < 2:53724/76‑1 TGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTTTATATTTAGATTCTTTTAT < 2:597199/76‑1 TGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTTTATATTTAGATTCTTTTAT < 2:597174/76‑1 TGAAAGCCAGGGTTTTTGAGAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTTTATATTTAGATTCTTTTAT < 2:597188/76‑1 TGAAAGCCAAGGTTTTTGAGAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTTTATATTTAGATTCTTTTAT < 2:597192/76‑1 GAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTTTATATTTAGATTCTTTTATT < 2:1374165/76‑1 GAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAAGTAGCTATTTGGTCTTTATATTTAGATTCTTTTATT < 2:953068/76‑1 TTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGA < 2:1483983/76‑1 AAAAATAATTCTAAAATTAGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAA < 2:94297/76‑1 AAAAATAATTCTAAAATTAGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAA < 2:94302/76‑1 TATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCA > 1:141871/1‑76 TATTTGGTCTTTACATTTAGATTCTTTTATCGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCA > 1:1199153/1‑76 ATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTATCATGACTAAACCACTCAG > 1:933442/1‑76 TGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCC > 1:1031766/1‑76 ACCAAGTACATGTGCAACATATATTATGAAAGCCAGGGTTTTTGATAGGACAAAAATAATTCTAAAATTAGCTATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2039152‑2039076‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctatttGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTAAACCACTCAGGCC > REL606/2039562‑2039636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |