New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	= 2114124	61 (1.250)	11 (0.250)	7/134	3.9	19.8%	coding (550/1968 nt)	ECB_02001	hypothetical protein
	?	REL606	= 2114622	35 (0.800)					coding (52/1968 nt)	ECB_02001	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGATTTCATCATTTCTCCTTGAAGACTTTGTTT  >  REL606/2114547‑2114697                                                                            |                                                                            ccAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGtt                                                                             >  1:746477/1‑76 (MQ=255) ccAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGtt                                                                             >  2:1079380/1‑76 (MQ=255) ccAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGtt                                                                             <  1:401793/76‑1 (MQ=255) ccAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGtt                                                                             >  2:1171221/1‑76 (MQ=255)    gAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGttttt                                                                          >  2:666251/1‑76 (MQ=255)    gAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGttttt                                                                          <  2:404670/76‑1 (MQ=255)    gAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGttttt                                                                          >  2:666253/1‑76 (MQ=255)    gAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGttttt                                                                          <  2:83055/76‑1 (MQ=255)     aaTACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTa                                                                         >  2:399498/1‑76 (MQ=255)     aaTACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTa                                                                         >  2:399483/1‑76 (MQ=255)     aaTACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTa                                                                         >  1:1033932/1‑76 (MQ=255)         cgtGACTTACCTGTGTCAGAGGCGCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGaa                                                                     <  1:1022493/74‑1 (MQ=255)         cgtGACTCACCTGTGTCAGAGGCTCCGTAGATAACATTGAGACCTTTAGAAAAAGTAGTGACGTAGTTTTTACGaa                                                                     <  1:1022479/74‑1 (MQ=255)         cTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGaa                                                                     <  1:1341428/76‑1 (MQ=255)         cTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGaa                                                                     <  1:935995/76‑1 (MQ=255)         cTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGaa                                                                     <  1:1022488/76‑1 (MQ=255)           tGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACg                                                                   <  1:1038342/76‑1 (MQ=255)           tGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACg                                                                   <  1:1038329/76‑1 (MQ=255)           tGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACg                                                                   <  1:1545027/76‑1 (MQ=255)           tGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCGTTATAAAAAGTAGTGACGTAGTTTTTACGaaag                                                                   <  2:531882/76‑3 (MQ=255)                tACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCcaac                                                              <  1:1386367/76‑1 (MQ=255)                 aCCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCcaaca                                                             <  1:1037060/76‑1 (MQ=255)                 aCCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCcaaca                                                             >  2:1224852/1‑76 (MQ=255)                   cTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAg                                                           <  2:901975/76‑1 (MQ=255)                   cTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAg                                                           <  1:1226519/76‑1 (MQ=255)                      tgtCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAAt                                                        <  2:166541/76‑1 (MQ=255)                         cAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCaa                                                     >  1:578436/1‑76 (MQ=255)                         cAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCaa                                                     >  1:578419/1‑76 (MQ=255)                          agagTCTCCGTAGATAACATTGAGACCTGTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCaaa                                                    <  1:330591/76‑1 (MQ=255)                              tctcCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACtat                                                >  1:429658/1‑76 (MQ=255)                               ctcCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACtatt                                               >  1:338143/1‑76 (MQ=255)                                 ccGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACtattga                                             <  2:842849/76‑1 (MQ=255)                                 ccGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACtattga                                             >  2:577081/1‑76 (MQ=255)                                   gTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACtattgata                                           >  1:824575/1‑76 (MQ=255)                                   gTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACtattgata                                           >  1:1473570/1‑76 (MQ=255)                                   gTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACtattgata                                           >  1:225790/1‑76 (MQ=255)                                    tAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACtattgatat                                          >  1:1028979/1‑76 (MQ=255)                                         aaCATTGAGGCCTTTATAAAAGGTAGTGATGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTgaga                                     <  1:746773/76‑1 (MQ=255)                                         aaCATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTgaga                                     <  1:1413191/76‑1 (MQ=255)                                          aCATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGat                                    <  2:503061/76‑1 (MQ=255)                                               gagaCCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGAt                               >  1:1200918/1‑76 (MQ=255)                                                agaCCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGAtt                              <  1:612029/76‑1 (MQ=255)                                                agaCCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGAtt                              >  1:553579/1‑76 (MQ=255)                                                agaCCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGAtt                              <  1:612032/76‑1 (MQ=255)                                                  aCCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGATTtc                            <  1:214742/76‑1 (MQ=255)                                                   ccTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGATTtca                           <  1:925546/76‑1 (MQ=255)                                                   ccTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGATTtca                           <  1:925534/76‑1 (MQ=255)                                                      ttATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGATTtcatca                        >  1:1571514/1‑76 (MQ=255)                                                         taAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGATTTCATCAttt                     <  2:819135/76‑1 (MQ=255)                                                                        tAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGATTTCATCATTTCTCCTTGAAGACttt      <  1:43359/76‑1 (MQ=255)                                                                            ttttACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGATTTCATCATTTCTCCTTGAAGACTTTGttt  <  2:1424462/76‑1 (MQ=255)                                                                            ttttACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGATTTCATCATTTCTCCTTGAAGACTTTGttt  <  2:635613/76‑1 (MQ=255)                                                                            |                                                                            CCAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTATAAAAAGTAGTGACGTAGTTTTTACGAACGCCAACAAGAATCAAACTATTGATATTGAGATATGATTTCATCATTTCTCCTTGAAGACTTTGTTT  >  REL606/2114547‑2114697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.