| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2039480 | 117 (1.970) | 15 (0.280) | 12/134 | 3.7 | 17.2% | coding (215/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | = 2039680 | 40 (0.760) | coding (15/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 117 total aligned reads displayed.
CTAGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATG > REL606/2039406‑2039555 | ctaGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATc > 1:1500688/1‑76 (MQ=255)ctaGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATc > 1:1500674/1‑76 (MQ=255) taGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCg < 2:538664/76‑1 (MQ=255) tgTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGa > 2:1137659/2‑76 (MQ=255) ttACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATAtt < 1:776992/76‑1 (MQ=255) ttCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAg < 1:221088/76‑1 (MQ=255) ttCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAg < 1:12858/76‑1 (MQ=255) ttCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAg < 1:138197/76‑1 (MQ=255) cATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGat < 2:436967/76‑1 (MQ=255) tGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGatat > 2:1293158/1‑76 (MQ=255) cTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATaa > 1:1557316/1‑76 (MQ=255) tttGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAAc < 1:577740/76‑1 (MQ=255) tGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACgg < 1:770709/76‑1 (MQ=255) cgcTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGAt < 1:226161/76‑1 (MQ=255) cgcTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGAt < 1:227284/76‑1 (MQ=255) cgcTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGAt < 1:1511672/76‑1 (MQ=255) cTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCt < 1:459892/76‑1 (MQ=255) cTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCt < 1:138463/76‑1 (MQ=255) cTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCt < 1:459883/76‑1 (MQ=255) tctcCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAgg < 1:486193/76‑1 (MQ=255) tctcCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAgg < 1:32143/76‑1 (MQ=255) tctcCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAgg < 1:225754/76‑1 (MQ=255) ctcctcCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGa < 1:712021/76‑1 (MQ=255) ctcctcCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGa < 1:712011/76‑1 (MQ=255) ctcctcCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGa < 1:1733348/76‑1 (MQ=255) ctcctcCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGa < 1:1146999/76‑1 (MQ=255) tcctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGaa < 1:426051/76‑1 (MQ=255) tcctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGaa < 1:1771770/76‑1 (MQ=255) tcctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGaa < 1:1676566/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:980881/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:977062/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:977082/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:839632/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:839652/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:1446898/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:1446891/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:1308383/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:1204459/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:1204449/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGAAAg < 1:698921/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGAAAg < 1:698942/76‑1 (MQ=255) ttccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGc < 1:139444/75‑1 (MQ=255) ctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGCACTAAGGAAGc > 1:824817/1‑76 (MQ=255) ctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGc < 1:1737872/76‑1 (MQ=255) ctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGc < 1:139427/76‑1 (MQ=255) ctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGc < 1:221819/76‑1 (MQ=255) ctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGc < 1:221828/76‑1 (MQ=255) tccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCa < 2:1397565/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:1830877/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:1864556/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:1114701/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:1464208/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:1464229/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:1864580/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:1864536/76‑1 (MQ=255) aTTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACg > 1:563541/1‑76 (MQ=255) ttGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGt > 1:1808917/1‑76 (MQ=255) tGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGtt < 1:939110/76‑1 (MQ=255) gATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGttt > 1:1389187/1‑76 (MQ=255) aTTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTa < 1:1723797/76‑1 (MQ=255) aTTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTa < 1:1723795/76‑1 (MQ=255) ttATGAATATCTTTTTATTATTCATATCGACATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTaa > 1:1541583/1‑76 (MQ=255) tATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAAt > 1:890295/1‑76 (MQ=255) aTGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATg > 1:916998/1‑76 (MQ=255) aTGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATg > 1:1231939/1‑76 (MQ=255) aTGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATg > 1:619105/1‑76 (MQ=255) tGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGa > 1:841428/1‑76 (MQ=255) aaTATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATc > 2:1639198/1‑76 (MQ=255) atatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATcc > 1:1759156/1‑76 (MQ=255) atatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATca < 2:1145061/76‑2 (MQ=255) tatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCa > 1:1484139/1‑76 (MQ=255) atCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCAt > 1:925529/1‑76 (MQ=255) cTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCa < 1:373696/76‑1 (MQ=255) ttttATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCaaa > 1:1443488/1‑76 (MQ=255) tttATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCaaaa > 1:1051117/1‑76 (MQ=255) ttattaTTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCaaaaa > 1:944700/1‑76 (MQ=255) ttattaTTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCaaaaa > 1:944720/1‑76 (MQ=255) ttattCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaa > 1:1026031/1‑76 (MQ=255) ttattCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaa > 1:700233/1‑76 (MQ=255) ttattCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaa > 1:700250/1‑76 (MQ=255) ttattCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaa > 1:1026017/1‑76 (MQ=255) attCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaaaa > 2:768251/1‑76 (MQ=255) attCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaaaa > 2:536382/1‑76 (MQ=255) ttCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAg < 1:1114431/76‑1 (MQ=255) ttCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAg < 1:1421889/76‑1 (MQ=255) ttCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAg < 1:359698/76‑1 (MQ=255) ttCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAg < 1:182498/76‑1 (MQ=255) tCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGt > 1:566137/1‑76 (MQ=255) cATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTa < 1:232078/76‑1 (MQ=255) cATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTa < 1:232068/76‑1 (MQ=255) atatCGGTATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaa < 1:1812981/76‑1 (MQ=255) atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaa < 1:61318/76‑1 (MQ=255) atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaa < 1:1776829/76‑1 (MQ=255) atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaa < 1:1098494/76‑1 (MQ=255) tatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGTAGCAACGTTTAATGATCCATCAAAAATAAAAGTaaa < 1:690172/76‑1 (MQ=255) tatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaaa < 1:1253855/76‑1 (MQ=255) tatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaaa < 1:397995/76‑1 (MQ=255) atCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAAt < 1:881391/76‑1 (MQ=255) atCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAAt < 1:881375/76‑1 (MQ=255) tCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATg < 1:360251/76‑1 (MQ=255) | CTAGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATG > REL606/2039406‑2039555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |