| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 2,103,918 | (CCAG)7→9 | coding (185/216 nt) | ECB_01992 → | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2103888 = | 10 (0.170) | 24 (0.590) | 20/104 | 1.2 | 85.9% | coding (155/216 nt) | ECB_01992 | hypothetical protein |
| ? | REL606 | = 2103895 | 1 (0.020) | coding (162/216 nt) | ECB_01992 | hypothetical protein | |||||
AAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATA > REL606/2103813‑2103963 | aaaCATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTcac < 1:1816383/76‑1 (MQ=255) cATGGGTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagc > 1:1123226/1‑76 (MQ=255) cATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagc > 1:112745/1‑76 (MQ=255) cATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagc < 2:1045281/76‑1 (MQ=255) acaatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagcc > 2:1098274‑M1/72‑76 (MQ=255) aTGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagcc < 1:1362789/76‑1 (MQ=255) tGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagcca > 1:449928/1‑76 (MQ=255) caaagaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagcca > 2:937896‑M1/71‑76 (MQ=255) ggCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccag < 2:542869/76‑1 (MQ=255) ggCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccag < 1:400161/76‑1 (MQ=255) aatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagcaggcagccagc < 2:968093‑M1/8‑1 (MQ=255) tgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagcc > 2:1474417‑M1/68‑76 (MQ=255) gaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagcta < 2:1180044‑M1/10‑3 (MQ=255) aaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagccag < 2:1056364‑M1/11‑1 (MQ=255) aCAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagcc > 2:1098274‑M2/1‑71 (MQ=255) cAAAGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagcca > 2:937896‑M2/1‑70 (MQ=255) aaTGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGC‑AGGcagccagc < 2:968093‑M2/76‑9 (MQ=255) tGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagcc > 2:1474417‑M2/1‑67 (MQ=255) gcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagccagccagcc < 2:84375‑M1/17‑1 (MQ=255) gcttcgttattgacttcgaatataaaggggtgaaattcgcattagatttcacagccagccagccagccagccagcc < 1:666618‑M1/17‑1 (MQ=255) gAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagcta < 2:1180044‑M2/76‑11 (MQ=255) cttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagccagccagcca < 1:826219‑M1/18‑1 (MQ=255) ttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagccagccagccag > 1:1447531‑M1/58‑76 (MQ=255) ttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagccagccagccag < 2:352382‑M1/19‑1 (MQ=255) aaaaCTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccag < 2:1056364‑M2/76‑12 (MQ=255) tcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagccagccagccagc < 2:531587‑M1/20‑1 (MQ=255) gttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagccagccagccagcca > 1:912453‑M1/55‑76 (MQ=255) tattgacttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagccagccagccagccagc < 1:286279‑M1/24‑1 (MQ=255) gCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagcc < 2:84375‑M2/76‑18 (MQ=255) gCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTCGCATTAGATTTCACAGCCAGCcagccagccagccagcc < 1:666618‑M2/76‑18 (MQ=255) cTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagcca < 1:826219‑M2/76‑19 (MQ=255) ttCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccag > 1:1447531‑M2/1‑57 (MQ=255) ttCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccag < 2:352382‑M2/76‑20 (MQ=255) tCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagc < 2:531587‑M2/76‑21 (MQ=255) gTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagcca > 1:912453‑M2/1‑54 (MQ=255) cttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagccagccagccagccagccagcca > 2:1136836‑M1/47‑76 (MQ=255) ttcgaatataaaggggtgaaatttgcattagatttcacagccagccagccagccagccagccagccagccagccag > 2:560203‑M1/46‑76 (MQ=255) tATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagc < 1:286279‑M2/76‑25 (MQ=255) aTTGACTATAAATATAAAGAGTAGAAATTTAAATTAGATTTCACAGacagccaaccagccagccagccagccagcc < 2:530667/76‑3 (MQ=16) tatataaaggggtgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGgtgt > 1:320487‑M1/42‑76 (MQ=255) aatataaaggggtgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGgtgt > 1:783144‑M1/42‑76 (MQ=255) aatataaaggggtgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGgtgt < 1:665514‑M1/35‑1 (MQ=255) aatataaaggggtgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGgtgt < 1:1700505‑M1/35‑1 (MQ=255) atataaaggggtgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGtgtg < 1:1835450‑M1/36‑1 (MQ=255) atcaaaggggtgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGa < 2:425535‑M1/37‑1 (MQ=255) cTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagcca > 2:1136836‑M2/1‑46 (MQ=255) ataaaggggtgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGaa > 2:711099‑M1/39‑76 (MQ=255) ttCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccag > 2:560203‑M2/1‑45 (MQ=255) tatataAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgt > 1:320487‑M2/2‑41 (MQ=255) ggggtgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTgg < 1:821602‑M1/43‑1 (MQ=255) aaTATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgt < 1:1700505‑M2/76‑36 (MQ=255) aaTATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgt < 1:665514‑M2/76‑36 (MQ=255) aaTATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgt > 1:783144‑M2/1‑41 (MQ=255) atatAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgtg < 1:1835450‑M2/76‑37 (MQ=255) ggtgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGCGGAt < 1:485921‑M1/45‑1 (MQ=255) ggtgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGCGTGAATGTGGAt > 2:1050437‑M1/32‑76 (MQ=255) atcaaagggGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgtga < 2:425535‑M2/73‑38 (MQ=255) ataAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgtgaa > 2:711099‑M2/1‑38 (MQ=255) tgaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGAttt > 1:1039069‑M1/30‑76 (MQ=255) taaaatttgcattagattccccacccagcCAGCCAGCCCGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGattn > 1:1141313‑M1/30‑75 (MQ=255) gaaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGAtttt > 2:861796‑M1/29‑76 (MQ=255) aaatttgcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTg < 1:1765219‑M1/49‑1 (MQ=255) ggggTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgtgaatgtgg < 1:821602‑M2/76‑44 (MQ=255) ggTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgtgaatgcggat < 1:485921‑M2/76‑46 (MQ=255) ggTGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggcgtgaatgtggat > 2:1050437‑M2/1‑31 (MQ=255) taaaattTGCATTAGATTCCCCACCCAGCcagccagcccgccagccagccagccagccaggtgtgaatgtggattn > 1:1141313‑M2/3‑29 (MQ=255) tGAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgtgaatgtggattt > 1:1039069‑M2/1‑29 (MQ=255) gcattagatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGtactac < 1:926720‑M1/55‑1 (MQ=255) gAAATTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgtgaatgtggatttt > 2:861796‑M2/1‑28 (MQ=255) aaaTTTGCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgtgaatgtggattttg < 1:1765219‑M2/76‑50 (MQ=255) agatttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAaat > 2:1835450‑M1/17‑76 (MQ=255) gCATTAGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgtgaatgtggattttgtactac < 1:926720‑M2/76‑56 (MQ=255) ttcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAAtt > 1:996127‑M1/13‑76 (MQ=255) tcacagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTg > 1:1399544‑M1/12‑76 (MQ=255) aGATTTCACAGCCAGCcagccagccagccagccagccagccagccaggtgtgaatgtggattttgtactacgaaat > 2:1835450‑M2/1‑16 (MQ=255) aTTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCtt < 2:97967/76‑1 (MQ=255) ttCACAGCCAGCcagccagccagccagccagccagccagccaggtgtgaatgtggattttgtactacgaaataatt > 1:996127‑M2/1‑12 (MQ=255) cagcCAGCCGGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCttat > 2:1603327‑M1/5‑76 (MQ=255) tCACAGCCAGCcagccagccagccagccagccagccagccaggtgtgaatgtggattttgtactacgaaataattg > 1:1399544‑M2/1‑11 (MQ=255) agcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCttatt < 1:196754‑M1/73‑1 (MQ=255) cCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTtattat < 2:1538873‑M1/75‑1 (MQ=255) CAGCCAGCCAGCCAGCTAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCACTCATtata < 2:613936‑M1/76‑1 (MQ=255) CAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATtata > 2:1229871‑M1/1‑76 (MQ=255) | AAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATA > REL606/2103813‑2103963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |