| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,015,771 | IS150 (–) +3 bp | coding (1192‑1194/1677 nt) | ECB_02816 → | KpsD protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2775877 | NA (NA) | 63 (1.080) | 48/146 | 0.2 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3015771 = | 0 (0.000) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
| * | ? | REL606 | = 3015773 | 0 (0.000) | 79 (1.330) | 53/148 | 0.1 | 100% | coding (1194/1677 nt) | ECB_02816 | KpsD protein |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
TATCGCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3015699‑3015773‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGAC < REL606/3894996‑3894921 TATCGCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT < 2:869129/76‑1TATCGCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT < 1:1657188/76‑1 CGCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTA > 1:872924/1‑76 GCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTAC > 1:379272/1‑76 GCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTAC > 2:83102/1‑76 GCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTAC > 1:576582/1‑76 ATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGAC < 1:1312594/76‑1 TCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACC > 2:85504/1‑76 CAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCC > 1:297134/1‑76 CAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCC > 2:510440/1‑76 AGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCC > 1:801702/1‑76 AGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCC > 1:801721/1‑76 GCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAA < 1:998649/76‑1 GCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAA < 1:840596/76‑1 TCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAG > 2:1694635/1‑76 TCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAG > 1:503571/1‑76 CAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGT > 2:1513891/1‑76 GCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTG > 1:27640/1‑76 GCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAACTTG > 1:1326338/1‑76 CGTCAGAAAGAGATGCTGAATCTCTCTCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGG < 1:1736682/76‑1 GTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGA > 1:1352531/1‑76 GTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGA < 2:503571/76‑1 TCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGAC > 1:353162/1‑76 CAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACA > 2:1528807/1‑76 AGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAG < 2:205400/76‑1 AGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAG > 2:1102098/1‑76 GAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGT > 1:246877/1‑76 GAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGT > 1:742440/1‑76 AAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTT < 1:983786/76‑1 GAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAA < 2:464619/76‑1 GAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAA < 2:541627/76‑1 GAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAA < 2:84314/76‑1 GATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:530173/1‑76 GATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 2:7060/76‑1 TGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:835462/76‑1 GCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA > 2:1458662/1‑76 TGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG < 1:833133/76‑1 TCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATA < 2:1118519/76‑1 CTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 2:388985/1‑76 TCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG < 2:1091865/76‑1 CGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > 2:1067529/1‑76 GCTGCAAAGGCGGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGAGAGTTAAACACGAGGCATATAGGTC < 1:612656/76‑1 GCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTC < 1:612640/76‑1 CTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT < 1:42618/76‑1 CTGCAAAAGCTGAAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT > 1:1360210/1‑76 TGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG > 2:93048/1‑76 GCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGA > 1:139645/1‑76 CAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAT > 2:1695067/1‑76 CAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAT > 1:1696567/1‑76 CAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAT > 1:1320108/1‑76 AAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATT < 1:1075530/76‑1 AAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATT < 1:497677/76‑1 AGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCG > 1:1162346/1‑76 GCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGA > 2:954004/1‑76 CTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGAT < 1:604138/76‑1 CTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGAT > 1:1025913/1‑76 CTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGAT < 1:613174/76‑1 TGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATA > 1:1270361/1‑76 TGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATA < 2:660098/76‑1 TGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATA > 1:122853/1‑76 GGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACGGTTAAACACGAGGCATATAGGTCTGATTCCGATAT > 2:473161/1‑76 GGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT > 2:1886501/1‑76 GGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT < 2:1314331/76‑1 GGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCA < 2:872924/76‑1 GGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCA < 2:1362174/76‑1 GCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTG < 2:578462/76‑1 CCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCTGATATTCAATTGG < 1:709656/76‑1 CTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGA < 2:1247958/76‑1 CTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGA < 2:1247937/76‑1 CACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT > 1:1693839/1‑76 ACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTC < 2:239362/76‑1 CTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA < 1:1482122/76‑1 CTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA > 1:72803/1‑76 CTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA > 2:1433333/1‑76 CTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 1:446071/1‑48 CTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 2:446071/48‑1 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < 2:72351/76‑1 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < 1:835513/76‑1 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA > 1:120529/1‑76 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < 1:940634/76‑1 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA > 2:1392129/1‑76 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGAC < 1:1398529/76‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGAC < 2:1577277/76‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGAC < 1:1201844/76‑1 TATCGCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3015699‑3015773‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGAC < REL606/3894996‑3894921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |