| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021263 = | 91 (1.520) | 4 (0.080) | 4/132 | 7.0 | 5.2% | coding (221/933 nt) | ECB_02820 | hypothetical protein |
| ? | REL606 | 3021399 = | 67 (1.270) | coding (85/933 nt) | ECB_02820 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAA > REL606/3021188‑3021338 | aaaCCTTGATGCCCGATAAAATCCGTAGGATTCTAAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCa < 1:1606974/76‑1 (MQ=255)aaaCCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCa > 2:603039/1‑76 (MQ=255)aaaCCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCa > 2:510515/1‑76 (MQ=255) aaCCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaa > 2:1076373/1‑76 (MQ=255) aaCCTGGATGACCAAAAAAATCCGTAGGATTCTGAAAAAAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaa < 2:662838/76‑1 (MQ=255) aCCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaa > 2:1658584/1‑76 (MQ=255) ccTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaaa > 1:1763342/1‑76 (MQ=255) ttGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaaaaa > 1:1148688/1‑76 (MQ=255) tgaggaCCGAAAAAACCCGTAGGATTCTAAAAAAAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAaat < 1:1306986/76‑1 (MQ=255) tgaCCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAaataat < 2:1194319/76‑1 (MQ=255) tgaCCGATAAAATCCGTAGGATTCTAAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAaataat < 2:1194329/76‑1 (MQ=255) gaCCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAAtt > 2:1049679/1‑76 (MQ=255) gaCCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAAtt < 1:1797110/76‑1 (MQ=255) aCCGAAAAAATCCGTAGGATTCGAAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAAttt < 1:1527776/76‑1 (MQ=255) gaaaaaaTCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACa < 1:450803/73‑1 (MQ=255) gATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACa > 1:901299/1‑76 (MQ=255) gATAAAATCCGTAGGATTCTAAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACa < 1:1401086/76‑1 (MQ=255) aaaaaaCCCGTAGGATTCGAAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACaa < 2:1635989/74‑1 (MQ=255) aTAAAATCCGTAGGATTCTAAAAAAAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACaa < 2:1636011/76‑1 (MQ=255) tAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAAc > 2:173112/1‑76 (MQ=255) aaaaTCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACt < 2:1892911/76‑1 (MQ=255) aaaTCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTc > 2:1815853/1‑76 (MQ=255) aaaCCCGTAGGATTCTAAAAAAAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACaaaag < 2:1238846/76‑4 (MQ=255) ccGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttt > 1:1764506/1‑76 (MQ=255) ccGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttt > 1:1764524/1‑76 (MQ=255) ccGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttt < 2:323142/76‑1 (MQ=255) ccGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttt < 2:323147/76‑1 (MQ=255) ccGTAGGATTCGAAAAAAACCAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttt < 2:131806/76‑1 (MQ=255) cGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCtttt > 2:940279/1‑76 (MQ=255) cGTAGGATTCTGAAAAAAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCtttt < 2:1734424/76‑1 (MQ=255) gaaGGATTCAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttttt < 2:781809/74‑1 (MQ=255) gTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttttt < 1:1630772/76‑1 (MQ=255) gTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttttt < 1:1461201/76‑1 (MQ=255) tAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTc > 2:1216066/1‑76 (MQ=255) tAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTc > 1:759566/1‑76 (MQ=255) tAGGATTCTGAAAAAAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATATTTTACAACTCCTTTTTc < 1:90144/76‑1 (MQ=255) gaGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTc < 1:1864238/75‑1 (MQ=255) cataTTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCt > 2:876298/4‑76 (MQ=255) aGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCt < 1:1644724/76‑1 (MQ=255) tGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTcc > 2:861498/1‑76 (MQ=255) aaaaGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACCACTCCTTTTTCTGGTTTCCCt > 1:38942/1‑76 (MQ=255) aaaaGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCt > 2:831709/1‑76 (MQ=255) aaaaGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCt > 1:676419/1‑76 (MQ=255) aaaaGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCt > 1:705685/1‑76 (MQ=255) aaaaGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCt > 1:705686/1‑76 (MQ=255) aaaaaaCAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTg < 1:1189091/76‑1 (MQ=255) aaaaaaCAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTg < 2:1768200/76‑1 (MQ=255) aaaGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTg < 2:1768187/76‑1 (MQ=255) aaaCAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTa < 2:661654/75‑1 (MQ=255) aaCAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTAc > 1:14234/1‑76 (MQ=255) aaGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATg > 1:212248/1‑76 (MQ=255) gCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTa < 1:562542/76‑1 (MQ=255) cGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAgt < 1:355962/76‑1 (MQ=255) aaTTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAgtgtg > 2:374824/1‑76 (MQ=255) aaTTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAgtgtg > 1:1695505/1‑76 (MQ=255) ttttATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGta > 1:1529531/1‑76 (MQ=255) ttttATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGta < 2:630825/76‑1 (MQ=255) ttttATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGta > 1:1430610/1‑76 (MQ=255) ttttATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCC‑TTTTCTGGTTTCCCTGTTACATGTAGTGTGtat > 1:1529532/1‑76 (MQ=255) tattaGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAg < 2:1666642/76‑1 (MQ=255) attaGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTAGATGTAGTGTGTACAGa < 1:1211756/76‑1 (MQ=255) attaGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGa < 1:1211760/76‑1 (MQ=255) attaGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGa > 2:99217/1‑76 (MQ=255) attaGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGa > 2:1294344/1‑76 (MQ=255) attaGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGa < 1:1831523/76‑1 (MQ=255) attaGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGa < 1:1831536/76‑1 (MQ=255) taGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGAcc < 2:1381460/76‑1 (MQ=255) gATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCAt < 1:300651/76‑1 (MQ=255) gATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCAt < 1:940279/76‑1 (MQ=255) aTTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATc < 1:731081/76‑1 (MQ=255) aTTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATc > 1:1359376/1‑76 (MQ=255) ttCGTCAACAAGCAAAAAATAATTTACAACTTCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCAtat < 2:648728/76‑3 (MQ=255) ttCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCATGTTACATGTAGTGTGTATAGACCATCa > 1:1410407/1‑76 (MQ=255) tCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAg < 2:1510023/76‑1 (MQ=255) gTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGtt > 1:234946/1‑76 (MQ=255) gTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGtt < 2:1359376/76‑1 (MQ=255) tCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGttt > 1:902950/1‑76 (MQ=255) tCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGttt < 2:60715/76‑1 (MQ=255) caacaaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGGCCATCAGtttt < 1:411848/76‑1 (MQ=255) caacaaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGtttt > 2:1268196/1‑76 (MQ=255) caacaaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGtttt > 1:927336/1‑76 (MQ=255) aacaaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTa > 1:760675/1‑76 (MQ=255) acaaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTat < 1:498469/76‑1 (MQ=255) aaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTatca > 1:1828023/1‑76 (MQ=255) aaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTatca < 1:1643851/76‑1 (MQ=255) aaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTaacc < 2:104357/76‑4 (MQ=255) aaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTaacc < 2:104364/76‑4 (MQ=255) cAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTAtcatca < 1:466465/76‑1 (MQ=255) cAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTAtcatca > 1:1017721/1‑76 (MQ=255) cAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTAtcatca < 1:1815853/76‑1 (MQ=255) cAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTAtcatca < 1:1237824/76‑1 (MQ=255) aaaaaaTAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCatcaa > 2:1662584/1‑76 (MQ=255) aaaaaaTAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCatcaa > 2:1662566/1‑76 (MQ=255) | AAACCTTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAA > REL606/3021188‑3021338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |