| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3588123 | 86 (1.430) | 5 (0.090) | 5/138 | 6.7 | 5.8% | coding (267/528 nt) | yhiE | DNA‑binding transcriptional activator |
| ? | REL606 | = 3588286 | 83 (1.500) | coding (430/528 nt) | yhiE | DNA‑binding transcriptional activator | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGATGCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTCACAATTA > REL606/3588048‑3588198 | aGATGCCGAGAGAATTATTGTTTTGGCACCTTATCGCATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGtt < 2:983595/76‑1 (MQ=255)aGATGCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGtt > 1:227314/1‑76 (MQ=255)aGATGCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGtt < 2:977547/76‑1 (MQ=255) aTGCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAg > 2:1719267/1‑76 (MQ=255) aTGCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAg > 1:341508/1‑76 (MQ=255) aTGCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAg > 2:395184/1‑76 (MQ=255) aTGCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAg > 2:739766/1‑76 (MQ=255) gCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGcc < 1:1526305/76‑1 (MQ=255) gCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGcc < 1:1526294/76‑1 (MQ=255) agagaATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCaa > 2:1368949/1‑76 (MQ=255) agagaATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCaa < 1:1401263/76‑1 (MQ=255) agaATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCaaag > 2:677189/1‑76 (MQ=255) gaATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCaagga > 2:1583721/1‑76 (MQ=255) gattattGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCaaagaa < 2:1447273/75‑1 (MQ=255) aaTTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCaaagaa < 1:268411/76‑1 (MQ=255) aaTTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCaaagaa < 1:268400/76‑1 (MQ=255) ttattGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCaaagaaag > 1:38021/1‑76 (MQ=255) ttattGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCaaagaaag < 2:1419600/76‑1 (MQ=255) tattGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGt < 2:996757/76‑1 (MQ=255) attGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTa > 2:662392/1‑76 (MQ=255) attGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTa > 2:1428132/1‑76 (MQ=255) ttGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTAt > 2:1637063/1‑76 (MQ=255) gTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCa < 1:11527/76‑1 (MQ=255) gTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCa < 2:1197947/76‑1 (MQ=255) ttttGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCaa > 2:276334/1‑76 (MQ=255) ttttGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCaa > 1:657642/1‑76 (MQ=255) tttGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCaaa < 2:1759859/76‑1 (MQ=255) ttGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCaaaa > 2:164594/1‑76 (MQ=255) tGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCaaaaa > 2:1486288/1‑76 (MQ=255) ggCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAAt < 1:545950/76‑1 (MQ=255) ggCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAAt < 1:545964/76‑1 (MQ=255) gCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAAtc > 2:540219/1‑76 (MQ=255) aCCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAAtctt > 1:1334022/1‑76 (MQ=255) aCCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAAtctt > 2:1636223/1‑76 (MQ=255) aCCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAAtctt > 1:1186556/1‑76 (MQ=255) aCCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCCATTTATTTTTTTAGCCCCACAGAAAGTATCAAAAAtctt > 1:767716/1‑76 (MQ=255) ttATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATcttctt > 2:175410/1‑76 (MQ=255) tATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTg < 1:443202/76‑1 (MQ=255) tATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTg > 2:1610392/1‑76 (MQ=255) tATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTg > 1:1095756/1‑76 (MQ=255) tCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTgag < 1:739766/76‑1 (MQ=255) tCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTgag < 1:30534/76‑1 (MQ=255) cacaTCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTgaga < 1:35335/76‑1 (MQ=255) acaTCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGAt > 1:1726402/1‑76 (MQ=255) aTCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTa < 2:805876/76‑1 (MQ=255) tCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTAc > 2:1742345/1‑76 (MQ=255) cAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACt > 2:1702751/1‑76 (MQ=255) cAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACt > 1:1198373/1‑76 (MQ=255) cAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACt > 1:1198388/1‑76 (MQ=255) gTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTa < 1:1049899/76‑1 (MQ=255) gTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTa > 1:685339/1‑76 (MQ=255) gTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTa < 1:437417/76‑1 (MQ=255) tAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTAt > 2:30887/1‑76 (MQ=255) aaaCTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATg > 2:647820/1‑76 (MQ=255) cTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTa > 1:1841253/1‑76 (MQ=255) cTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTa < 1:319143/76‑1 (MQ=255) tAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTaa < 2:1223640/76‑1 (MQ=255) tAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTaa < 1:1880859/76‑1 (MQ=255) aaaaGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTaaa > 2:640610/1‑76 (MQ=255) aaaaGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTaaa > 2:608359/1‑76 (MQ=255) aaaaGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTaaa < 2:341508/76‑1 (MQ=255) aaaGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAac > 1:184670/1‑76 (MQ=255) aaaGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAac > 1:405406/1‑76 (MQ=255) aaGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGcc < 1:871517/76‑1 (MQ=255) gcCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCAt < 1:1049721/76‑1 (MQ=255) gcCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCAt < 2:693284/76‑1 (MQ=255) gcCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCAt < 1:613771/76‑1 (MQ=255) gcCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCAt < 1:613783/76‑1 (MQ=255) ccTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATa > 1:327989/1‑76 (MQ=255) ccTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATa > 2:1370968/1‑76 (MQ=255) ccTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATa < 2:1717779/76‑1 (MQ=255) cTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATaa > 1:579602/1‑76 (MQ=255) cTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATaa < 2:1811055/76‑1 (MQ=255) cTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATaa < 2:1356338/76‑1 (MQ=255) tatttattTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAg < 2:122284/76‑1 (MQ=255) atttatttTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGa > 1:305317/1‑76 (MQ=255) atttatttTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGa > 1:1278087/1‑76 (MQ=255) tttatttTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGaa > 1:937218/1‑76 (MQ=255) tatttTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAAtt < 1:1096208/76‑1 (MQ=255) atttTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTc < 1:955580/76‑1 (MQ=255) atttTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTc < 2:1387086/76‑1 (MQ=255) ttttGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTca < 2:1113892/76‑1 (MQ=255) ttGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTcaca > 1:1888275/1‑76 (MQ=255) ttGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTcaca > 1:799839/1‑76 (MQ=255) ttGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTcaca > 2:1306171/1‑76 (MQ=255) ttGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTcaca > 2:1306158/1‑76 (MQ=255) gTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAAATTACTTATGGTAAACACTTGCCCCATAAGAATTCACAAt > 1:366447/1‑76 (MQ=255) ttAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTCACAAtt < 2:1029716/76‑1 (MQ=255) tAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTCACAATTa > 2:229321/1‑76 (MQ=255) | AGATGCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTCACAATTA > REL606/3588048‑3588198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |