| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2038724 = | 51 (0.820) | 12 (0.220) | 6/134 | 5.8 | 20.3% | coding (225/822 nt) | wbbB | putative glycosyltransferase WbbB |
| ? | REL606 | 2039214 = | 49 (0.890) | coding (481/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TGCATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCTT > REL606/2038649‑2038798 | tGCATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTAtcttct < 1:587003/76‑1 (MQ=255) gCATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTa < 2:524855/76‑1 (MQ=255) aTTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaaa < 1:367347/76‑1 (MQ=255) tATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaaaaa < 1:8821/76‑1 (MQ=255) tATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaaaaa < 1:1358470/76‑1 (MQ=255) tGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAAt < 1:1243365/76‑1 (MQ=255) tGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAAt < 2:835837/76‑1 (MQ=255) tttCATGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCt > 2:944176/1‑76 (MQ=255) tttCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCt > 1:163755/1‑76 (MQ=255) tctCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCt > 1:163747/3‑76 (MQ=255) tCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTAt > 2:1857549/1‑76 (MQ=255) tCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTAt > 1:611107/1‑76 (MQ=255) cAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTAtt > 2:291356/1‑76 (MQ=255) aaGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTAttc > 2:488413/1‑76 (MQ=255) cAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTAttccttcc > 1:1539715/1‑76 (MQ=255) cAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTAttccttcc > 1:929569/1‑76 (MQ=255) aaTGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATtccttcct > 2:1210961/1‑76 (MQ=255) gTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTtat < 1:1291449/76‑1 (MQ=255) gTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTtat < 2:793927/76‑1 (MQ=255) gTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTtat > 1:953106/1‑76 (MQ=255) gTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTtat < 2:1153482/76‑1 (MQ=255) aTTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCa < 2:544473/76‑1 (MQ=255) aTTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCa < 2:544461/76‑1 (MQ=255) ttCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAg < 1:614048/76‑1 (MQ=255) aaaaTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGaan < 1:488413/76‑2 (MQ=255) aaaTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGaaaa < 1:1629485/76‑1 (MQ=255) aaaTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGaaaa > 2:833318/1‑76 (MQ=255) aaTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAAc > 2:307972/1‑76 (MQ=255) ttagaATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTc > 2:490255/3‑76 (MQ=255) aTTGATACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCaaaaa > 1:1739927/1‑76 (MQ=255) tGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAaga < 1:1042217/76‑1 (MQ=255) tGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAaga < 1:1042205/76‑1 (MQ=255) gTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAgaga < 1:87428/76‑1 (MQ=255) aTGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTccc > 2:1750118/1‑76 (MQ=255) tagTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCg > 1:1801528/3‑76 (MQ=255) tGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCg > 1:1560467/1‑76 (MQ=255) ggTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGt < 1:733530/76‑1 (MQ=255) ggTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAACAGAATTTGTCCCGt < 1:733513/76‑1 (MQ=255) taataaTGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGttt < 1:358992/76‑1 (MQ=255) taataaTGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGttt > 1:308756/1‑76 (MQ=255) ataatGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTc > 2:1545655/1‑76 (MQ=255) aatGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGa > 1:302258/1‑76 (MQ=255) tGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGata > 1:534728/1‑76 (MQ=255) gAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGatat < 1:1888348/76‑1 (MQ=255) aGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGatata < 2:656561/76‑2 (MQ=255) gCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGa > 2:1961048/1‑76 (MQ=255) gCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGa > 1:200845/1‑76 (MQ=255) cTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGaa > 2:1180214/1‑76 (MQ=255) cTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGaa < 1:315977/76‑1 (MQ=255) tATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGaaa > 2:506282/1‑76 (MQ=255) ctAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCtt < 2:946160/76‑1 (MQ=255) | TGCATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCTT > REL606/2038649‑2038798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |