| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 1,304,524 | Δ367 bp | [yciU]–[cls] | [yciU], [cls] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 1304524 | 1304890 | 367 | 33 [0] | [0] 33 | [yciU]–[cls] | [yciU],[cls] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1304523 | 0 (0.000) | 32 (0.590) | 26/148 | 1.3 | 100% | coding (222/330 nt) | yciU | dsDNA‑mimic protein |
| ? | REL606 | 1304891 = | 0 (0.000) | coding (1349/1461 nt) | cls | cardiolipin synthetase | |||||
CTTTTTCGCGGCATAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1304450‑1304523‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCAGAGTAATCTCGAAATTTAGCCACAGACTC > REL606/1304891‑1304965 CTTTTTCGCGGCATAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTG > 1:1440223/1‑76 TTCGCGGCATAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACG < 2:1132638/76‑1 GCGGCATAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCG < 1:1286316/76‑1 CGGCATAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGG < 1:1088470/76‑1 CATAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAA < 1:1327148/76‑1 ATAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAG > 2:1374079/1‑76 ATAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAG < 1:1353605/76‑1 TAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGG < 2:607747/76‑1 TAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGG < 1:631888/76‑1 AACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGg > 2:1315014/1‑75 AACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGT > 2:1670853/1‑76 CAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCT < 1:308651/76‑1 CAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCT < 1:1267610/76‑1 AGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTG < 2:320731/76‑1 GCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAAC > 2:1205744/1‑76 CGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACC > 2:1335579/1‑76 AAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTT > 2:1256481/1‑76 AAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGGCTGCACCAAAACCTT > 2:338654/1‑76 ACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTAT < 2:75431/76‑1 GTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCG < 1:372402/76‑1 GTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCG < 1:372423/76‑1 TTGATTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGA > 1:175736/1‑76 gTTTCACCATCTTCGCTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTG < 2:684239/75‑1 TTTCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCCAAACCTTTATCGTCGATTGC > 1:329602/1‑76 TCACCATCTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCA < 1:935284/76‑1 CTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCAGAGTAAT < 2:1441552/76‑1 CTTCACTGTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCAGAGTAAT < 1:1478434/76‑1 GTCCGCCAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCAGAGTAATCTCGAAA > 1:1420511/1‑76 CAGACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCAGAGTAATCTCGAAATTTAGC > 2:982413/1‑76 ACCAATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCAGAGTAATCTCGAAATTTAGCCAC < 1:126378/76‑1 AATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCAGAGTAATCTCGAAATTTAGCCACAGA < 2:1306731/76‑1 AATCTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCAGAGTAATCTCGAAATTTAGCCACAGA > 1:1484381/1‑76 CTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCAGAGTAATCTCGAAATTTAGCCACAGACTC > 1:702141/1‑76 CTTTTTCGCGGCATAACAGAATGCGGGCGAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1304450‑1304523‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTGAACGGCGGCAAGGTCTGCACCAAAACCTTTATCGTCGATTGCCAGAGTAATCTCGAAATTTAGCCACAGACTC > REL606/1304891‑1304965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |