| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4487211 = | 115 (2.110) | 7 (0.140) | 6/140 | 5.5 | 6.2% | coding (33/1119 nt) | yjhC | predicted oxidoreductase |
| ? | REL606 | 4487425 = | 103 (2.030) | coding (247/1119 nt) | yjhC | predicted oxidoreductase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 111 total aligned reads displayed.
AGTAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAGCGT > REL606/4487350‑4487497 | aGTAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGa > 2:917083/1‑76 (MQ=255) gTAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGaa < 2:1026083/76‑1 (MQ=255) gTAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGaa < 2:275202/76‑1 (MQ=255) gTAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGaa > 1:425397/1‑76 (MQ=255) tAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAAt > 2:11064/1‑76 (MQ=255) tAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAAt > 2:1695705/1‑76 (MQ=255) tAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAAt < 2:1709628/76‑1 (MQ=255) tAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAAt < 1:432629/76‑1 (MQ=255) aaaTTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATa > 1:530407/1‑76 (MQ=255) aaaTTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATa > 1:200588/1‑76 (MQ=255) aTTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATaag < 1:781891/76‑1 (MQ=255) ttAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATaaga > 2:1206972/1‑76 (MQ=255) tAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATaagaa > 2:1534096/1‑76 (MQ=255) aGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATaagaag < 1:1148079/76‑1 (MQ=255) gTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGc < 1:1099806/76‑1 (MQ=255) gTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGc < 2:305809/76‑1 (MQ=255) gTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGc > 2:308826/1‑76 (MQ=255) cGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCAt < 1:93026/76‑1 (MQ=255) cGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCAt < 1:408264/76‑1 (MQ=255) gATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATg > 1:1108972/1‑76 (MQ=255) gATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATg > 1:623775/1‑76 (MQ=255) gATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATg < 1:365558/76‑1 (MQ=255) ttGAGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGtt < 1:768570/76‑1 (MQ=255) ttGAGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCACGtt < 1:768569/76‑1 (MQ=255) tGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGttt < 2:62634/76‑1 (MQ=255) cGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGttttt < 1:1526815/76‑1 (MQ=255) cGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGttttt < 1:200488/76‑1 (MQ=255) cGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGttttt < 1:83058/76‑1 (MQ=255) tGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTtg > 1:1105873/1‑76 (MQ=255) tGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTtg > 2:163693/1‑76 (MQ=255) gATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTtgt < 1:385338/76‑1 (MQ=255) aTCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTtgtg < 2:1668615/76‑1 (MQ=255) aTCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTtgtg < 1:412514/76‑1 (MQ=255) aTCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTtgtg < 1:1218213/76‑1 (MQ=255) aTCGTAGCCACCCCAAATTATCTACATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTtgtg < 1:1218226/76‑1 (MQ=255) tCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTtgtaa < 1:1366557/76‑3 (MQ=255) tCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGa < 1:1112999/76‑1 (MQ=255) tCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGa < 1:1112990/76‑1 (MQ=255) cGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGaa < 1:359646/76‑1 (MQ=255) cGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGaa > 1:1709258/1‑76 (MQ=255) tAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGaaaa > 2:809455/1‑76 (MQ=255) aGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGaaaaa > 2:485352/1‑76 (MQ=255) aGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGaaaaa < 2:657048/76‑1 (MQ=255) ccACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAAcc < 1:815262/76‑1 (MQ=255) aCCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCaa > 1:1267333/1‑76 (MQ=255) ccccAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAAt < 2:802379/76‑1 (MQ=255) ccccAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAAt < 2:798893/76‑1 (MQ=255) ccAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTg < 2:1026868/76‑1 (MQ=255) ccAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTg < 2:1632673/76‑1 (MQ=255) cAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGc < 1:1281541/76‑1 (MQ=255) cAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGc > 1:1456155/1‑76 (MQ=255) aaaTTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCa > 1:36203/1‑76 (MQ=255) aaaTTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCa > 1:36220/1‑76 (MQ=255) aaaTTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCa > 2:44166/1‑76 (MQ=255) aaTTATCTACATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCAt < 2:783136/76‑1 (MQ=255) aTTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCAtt < 2:1599239/76‑1 (MQ=255) ttATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTa > 2:81316/1‑76 (MQ=255) ttATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTa > 1:551498/1‑76 (MQ=255) tATCTGCATAAAGAGCCAGTAATTGAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTaa < 2:1394083/76‑1 (MQ=255) tATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTaa > 1:294086/1‑76 (MQ=255) tATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTaa < 1:1321536/76‑1 (MQ=255) aTCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAg > 2:765440/1‑76 (MQ=255) tCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGt < 1:883120/76‑1 (MQ=255) tCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGt < 1:881157/76‑1 (MQ=255) cTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATaa < 1:1098644/38‑1 (MQ=255) cTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATaa > 2:1098644/1‑38 (MQ=255) cTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGtt > 1:1006052/1‑76 (MQ=255) cTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGtt < 1:756580/76‑1 (MQ=255) tGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTa < 2:1451081/76‑1 (MQ=255) tGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTa < 1:30450/76‑1 (MQ=255) gCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTAt > 2:1174377/1‑76 (MQ=255) aTAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGa > 2:863848/1‑76 (MQ=255) aTAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGa > 1:1473040/1‑76 (MQ=255) aaaGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAg < 1:126003/76‑1 (MQ=255) aaaGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAg < 1:1586421/76‑1 (MQ=255) aCCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATtgt < 1:516833/76‑1 (MQ=255) ccAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATtgtg > 1:1422224/1‑76 (MQ=255) cAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATtgtgt > 1:426801/1‑76 (MQ=255) cAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATtgtgt > 1:426804/1‑76 (MQ=255) aTTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGata > 1:1378630/1‑76 (MQ=255) ttAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGatat > 1:13437/1‑76 (MQ=255) ttAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGatat > 1:383666/1‑76 (MQ=255) aaGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGt > 2:238505/1‑76 (MQ=255) aaGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGt > 1:1003736/1‑76 (MQ=255) aaGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGt > 2:1461906/1‑76 (MQ=255) aaGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGt < 2:1050938/76‑1 (MQ=255) aaGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGt > 1:1478973/1‑76 (MQ=255) cagcaAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCaa < 2:1300824/76‑1 (MQ=255) cagcaAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCaa > 2:842571/1‑76 (MQ=255) agcaAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCaaa < 1:895118/76‑1 (MQ=255) agcaAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCaaa > 1:680888/1‑76 (MQ=255) agcaAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCaaa < 2:219063/76‑1 (MQ=255) gcaAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAg < 1:390126/76‑1 (MQ=255) gcaAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAg < 2:1179230/76‑1 (MQ=255) gcaAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAg < 1:1100811/76‑1 (MQ=255) caAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAGc > 2:347538/1‑76 (MQ=255) caAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAGc > 2:313014/1‑76 (MQ=255) aaaGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAGCg > 2:9781/1‑76 (MQ=255) aaaGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAGCg > 1:61658/1‑76 (MQ=255) aaaGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAGCg > 2:1320207/1‑76 (MQ=255) | AGTAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAGCGT > REL606/4487350‑4487497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |