| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 3893551 | 3901930 | 8380 | 52 [7] | [0] 58 | insJ‑5–[yieO] | insJ‑5,insK‑5,rbsD,rbsA,rbsC,rbsB,rbsK,rbsR,[yieO] |
TGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG > REL606/3893475‑3893625 | tGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCa > 2:972888/1‑76 (MQ=255) gCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAg < 2:615455‑M1/76‑2 (MQ=255) tGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAgggg < 1:1283021‑M1/76‑5 (MQ=255) ccAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactg < 1:1396159‑M1/76‑9 (MQ=255) ccAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactg > 1:22622‑M1/1‑68 (MQ=255) cAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgc > 2:1145785‑M1/1‑62 (MQ=255) cAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgc < 1:542237‑M1/76‑15 (MQ=255) tGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcaccca < 1:394494‑M1/76‑20 (MQ=255) tGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCAttt > 2:1063100/1‑76 (MQ=255) gAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccat > 1:737191‑M1/1‑56 (MQ=255) aaaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccatt < 1:143177‑M1/76‑22 (MQ=255) aaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattt > 2:554213‑M1/1‑54 (MQ=255) tCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttg < 1:510525‑M1/76‑25 (MQ=255) cccGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgt < 2:630591‑M1/76‑26 (MQ=255) gCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttgg > 2:898593‑M1/1‑48 (MQ=255) gCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttgg > 1:906033‑M1/1‑48 (MQ=255) ccAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttgga > 2:1139740‑M1/1‑47 (MQ=255) aaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGa > 1:597298/1‑76 (MQ=255) cAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatg > 2:953192‑M1/1‑42 (MQ=255) ggTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaa < 1:427972‑M1/76‑38 (MQ=255) gTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGa > 1:822226/1‑76 (MQ=255) aTCGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatgga < 2:1445295‑M1/76‑42 (MQ=255) cGAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaat > 1:206375‑M1/1‑33 (MQ=255) gAACTGGGTACTCGGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaata < 2:311824‑M1/76‑45 (MQ=255) gAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaata < 1:458761‑M1/76‑45 (MQ=255) gAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaata < 2:11632‑M1/76‑45 (MQ=255) gAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaata > 2:486947‑M1/1‑32 (MQ=255) gAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaata > 1:961051‑M1/1‑32 (MQ=255) gAACTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaata < 1:20277‑M1/76‑45 (MQ=255) aCTGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagc > 2:1279742‑M1/1‑30 (MQ=255) tGGGTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagccc > 2:1641852‑M1/1‑28 (MQ=255) tGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTa < 1:555364/76‑1 (MQ=255) ggTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:236322‑M1/76‑51 (MQ=255) ggTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:434088‑M1/76‑51 (MQ=255) ggTACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:810589‑M1/1‑26 (MQ=255) tACTCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 2:1293123‑M1/1‑24 (MQ=255) tCAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 2:1053127‑M1/76‑56 (MQ=255) cAGGTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg < 1:1444232‑M1/76‑57 (MQ=255) gTCGAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca < 2:1593352‑M1/76‑60 (MQ=255) gAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag > 2:818984‑M1/1‑14 (MQ=255) gAAATCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag > 2:880478‑M1/1‑14 (MQ=255) aaTCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc < 2:1585728‑M1/76‑65 (MQ=255) aaTCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc < 1:898593‑M1/76‑65 (MQ=255) tCTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa < 1:935587‑M1/76‑67 (MQ=255) cTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaa < 1:367191‑M1/76‑68 (MQ=255) cTAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaa < 1:1166757‑M1/76‑68 (MQ=255) tAACGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa > 2:213450‑M1/1‑8 (MQ=255) aCGCCAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaata < 1:301944‑M1/76‑71 (MQ=255) gCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtt < 2:1503547/76‑1 (MQ=39) ccAggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc > 2:460512‑M1/1‑3 (MQ=255) aggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt < 2:653795‑M1/76‑76 (MQ=255) aggggactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt > 1:1650069‑M1/1‑1 (MQ=255) | TGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG > REL606/3893475‑3893625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |