| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 799331 | 92 (1.760) | 3 (0.060) | 3/140 | 6.5 | 4.0% | intergenic (‑56/+728) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor |
| ? | REL606 | = 799578 | 60 (1.230) | intergenic (‑303/+481) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TAATATATTGTAATGATAATATCATATGATTTGCTTGGATATAATTTGTTAGCAAATATTATGTTGAACTATTTAAATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/799251‑799331‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcatCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTTTGCTTATCCATGTCTACATTATCG < REL606/799578‑799507 TAATATATTGTAATGATAATATCATATGATTTGCTTGGATATAATTTGTTAGCAAATA‑TATGTTGAACTATTTAAA > 1:364165/1‑76 ATATATTGTAATGATAATATCATATGATTTGCTTGGATATAATTTGTTAGCAAATATTATGTTGAACTATTTAAAT < 1:1628244/76‑1 ATATATTGTAATGATAATATCATATGATTTGCTTGGATATAATTTGTTAGCAAATATTATGTTGAACTATTTAAAT < 1:1655103/76‑1 ATATATTGTAATGATAATATCATATGATTTGCTTGGATATAATTTGTTAGCAAATATTATGTTGAACTATTTAAAT < 2:1218808/76‑1 TATATTGTAATGATAATATCATATGATTTGCTTGGATATAATTTGTTAGCAAATATTATGTTGAACTATTTAAATC < 1:465268/76‑1 ATATTGTAATGATAATATCATATGATTTGCTTGGATATAATTTGTTAGCAAATATTATGTTGAACTATTTAAATCA > 1:1454500/1‑76 GGATATAATTTGTTAGCAAATATTATGTTGAACTATTTAAATCATCAATTCAGAATACAAAGTCACATGCTAATGT > 2:457473/1‑76 AAATATTATGTTGAACTATTTAAATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTT > 2:678846/1‑76 AATATTATGTTGAACTATTTAAATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTTT > 2:1452805/1‑76 ATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTTTGCTTATCCATGTCTACATTATC > 1:1081051/1‑76 ATCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTTTGCTTATCCATGTCTACATTATC < 2:710822/76‑1 TCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTTTGCTTATCCATGTCTACATTATCG < 1:1454122/76‑1 TCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTTTGCTTATCCATGTCTACATTATCG > 2:788806/1‑76 TCATCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTTTGCTTATCCATGTCTACATTATCG < 2:874853/76‑1 TAATATATTGTAATGATAATATCATATGATTTGCTTGGATATAATTTGTTAGCAAATATTATGTTGAACTATTTAAATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/799251‑799331‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcatCAATTCAGAATACAAAGTCACATGCTAATGTTCTGCATTGGTATCTTTTGCTTATCCATGTCTACATTATCG < REL606/799578‑799507 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |