| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 4459012 | 90 (1.720) | 4 (0.080) | 3/136 | 6.4 | 4.4% | coding (299/1653 nt) | yjgL | hypothetical protein |
| ? | REL606 | = 4459506 | 94 (1.990) | coding (793/1653 nt) | yjgL | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACGAAGCGGGAAGAAATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACTTTCCGC > REL606/4458937‑4459087 | aCGAAGCGGGAAGAAATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAAt > 1:1412811/1‑76 (MQ=255) cGAAGCGGGAAGAAATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATg < 1:833382/76‑1 (MQ=255) gAAGCGGGAAGAAATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGa < 2:281065/76‑1 (MQ=255) gAAGCGGGAAGAAATATGATAGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGa < 2:281054/76‑1 (MQ=255) aaGCGGGAAGAAATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGaa > 2:946602/1‑76 (MQ=255) cGGGAAGAAATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGtt > 2:1172838/1‑76 (MQ=255) gggAAGAAATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGttt < 2:1173412/76‑1 (MQ=255) gggAAGAAATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGttt < 2:452585/76‑1 (MQ=255) aagaaATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGtt < 2:645767/76‑1 (MQ=255) agaaATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTa < 2:1354608/76‑1 (MQ=255) tatGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGaat > 2:1423708/1‑76 (MQ=255) atgatgGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGaata < 1:1020782/76‑1 (MQ=255) atgatgGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGaata < 2:1643827/76‑1 (MQ=255) tgatgGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGaataa < 1:1222225/76‑1 (MQ=255) ggCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCt > 1:1200579/1‑76 (MQ=255) gCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTg < 2:262119/76‑1 (MQ=255) cTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGa < 1:146152/76‑1 (MQ=255) cATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAg < 2:723765/76‑1 (MQ=255) cATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAg < 2:723781/76‑1 (MQ=255) cATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAg > 1:1182398/1‑76 (MQ=255) cATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAg > 2:823094/1‑76 (MQ=255) tatTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGACTAATCCTGAAggg > 2:1587715/1‑76 (MQ=255) tatTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAggg < 1:1403305/76‑1 (MQ=255) tatTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAggg > 2:1587707/1‑76 (MQ=255) atTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAgggg < 2:1330364/76‑1 (MQ=255) atTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAgggg < 2:1313350/76‑1 (MQ=255) tGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGaa > 2:1557979/1‑76 (MQ=255) tGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAAGCCTGAAGGGGaa < 2:959234/76‑1 (MQ=255) gAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAAc < 2:246499/76‑1 (MQ=255) aGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACg < 1:275268/76‑1 (MQ=255) aGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACg < 2:167927/76‑1 (MQ=255) aGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACg < 1:149072/76‑1 (MQ=255) ccTCATCTTTTATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGc > 2:913427/1‑76 (MQ=255) ccTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGc > 1:1206272/1‑76 (MQ=255) ccTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGc > 1:1206278/1‑76 (MQ=255) cATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGa > 1:1308837/1‑76 (MQ=255) aTCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGAt > 1:551885/1‑76 (MQ=255) tCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGAtt < 2:623530/76‑1 (MQ=255) tCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGAtt > 2:289475/1‑76 (MQ=255) cTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGAttt < 1:707617/76‑1 (MQ=255) ttATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTa > 1:74993/1‑76 (MQ=255) ttATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTa < 1:924685/76‑1 (MQ=255) tataTCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTAt < 1:144149/76‑1 (MQ=255) atatCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATc < 2:897107/76‑1 (MQ=255) atatCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATc > 2:610683/1‑76 (MQ=255) atatCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATc < 2:897131/76‑1 (MQ=255) tatCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGCGCGGATTTATCt > 2:173424/1‑76 (MQ=255) tatCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCt < 1:1300759/76‑1 (MQ=255) tatCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCt < 2:586915/76‑1 (MQ=255) tatCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCt < 2:719051/76‑1 (MQ=255) atCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTa > 2:1612161/1‑76 (MQ=255) tCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTaa < 1:648225/76‑1 (MQ=255) cAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAg < 1:355909/76‑1 (MQ=255) aaaaTAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGt < 2:1073759/76‑1 (MQ=255) aaaaTAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGt > 1:1071425/1‑76 (MQ=255) aaaTAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTg < 2:745115/76‑1 (MQ=255) aaaTAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTg < 1:488220/76‑1 (MQ=255) ataatGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGa > 1:712954/1‑76 (MQ=255) taatGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGaa > 1:852699/1‑76 (MQ=255) atgatgGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAAt > 1:608715/1‑76 (MQ=255) tgatgGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATa < 1:975057/76‑1 (MQ=255) tgatgGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATa > 1:846658/1‑76 (MQ=255) gatgGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAg > 1:1043410/1‑76 (MQ=255) atgGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGa > 1:1064517/1‑76 (MQ=255) atgGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGa > 2:1411465/1‑76 (MQ=255) atgGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGa > 1:1064511/1‑76 (MQ=255) atgGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGa < 2:977552/76‑1 (MQ=255) gCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAAt < 2:954295/76‑1 (MQ=255) gCAGTGAGATAATGAAGTTTGTTATGAAGAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAAt < 1:1033180/76‑1 (MQ=255) cAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATc > 1:920189/1‑76 (MQ=255) aGTGCGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATca > 1:548394/1‑76 (MQ=255) aGTGCGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATca > 1:548390/1‑76 (MQ=255) aGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATca > 1:1658573/1‑76 (MQ=255) gTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATcac < 1:922432/76‑1 (MQ=255) tGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATcaca > 2:1185859/1‑76 (MQ=255) tGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATcaca > 1:698283/1‑76 (MQ=255) tGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATcaca > 1:698273/1‑76 (MQ=255) tGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATcaca > 1:502047/1‑76 (MQ=255) tGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATcaca > 1:502046/1‑76 (MQ=255) gagaTAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCacac < 1:381627/76‑1 (MQ=255) agaTAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACt > 1:216862/1‑76 (MQ=255) agaTAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACt > 1:566025/1‑76 (MQ=255) agaTAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGCGGAAATAGAAATCACACt > 2:18413/1‑76 (MQ=255) gaTAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACtt < 2:76751/76‑1 (MQ=255) aTAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACttt < 2:131661/76‑1 (MQ=255) aTAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACttt > 1:249754/1‑76 (MQ=255) aTAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACttt > 1:249770/1‑76 (MQ=255) aaTGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACTTTcc > 2:577668/1‑76 (MQ=255) aaTGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACTTTcc > 1:1618835/1‑76 (MQ=255) aaTGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACTTTcc > 1:140606/1‑76 (MQ=255) tGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACTTTCCGc > 1:646000/1‑76 (MQ=255) | ACGAAGCGGGAAGAAATATGATGGCTCATATTGAGTCCTCATCTTATATCAAAAATAATGATGGCAGTGAGATAATGAAGTTTGTTATGAATAATCCTGAAGGGGAACGAGCGGATTTATCTAAGGTGGAAATAGAAATCACACTTTCCGC > REL606/4458937‑4459087 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |