| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021732 = | 93 (1.880) | 15 (0.330) | 7/138 | 4.3 | 15.3% | coding (953/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | 3022271 = | 81 (1.780) | coding (414/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3021809‑3021732‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatatACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTT > REL606/3022271‑3022344 ATGTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAAT < 2:441997/76‑1 GTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTG < 2:949711/76‑1 GTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTG < 2:949710/76‑1 AGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGAT < 2:565094/76‑1 TGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTT < 2:1062394/76‑1 TGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTT < 2:1062412/76‑1 TGCAAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTT < 2:1062388/76‑1 GCTAAAAGAAAACAAGCCGGAAAGAATACATACCCCCAAAAGAAGGCTGCCGTTTTATAAGAATATACCTGATTTC < 2:699881/76‑1 AAAAGAAACCAAGCCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATGCCTGATTTCAAA < 2:630348/76‑1 AAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAA < 2:501073/76‑1 AAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAA < 2:875067/76‑1 AAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAA < 2:875083/76‑1 AGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATAT < 2:1140652/76‑1 AGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAAGGCTGCCGTTTTATAAGAATATACCTGATTTCAAATAT < 2:265301/76‑1 CAATGCGGAAAAAATACATAACCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATCTATCA < 2:1111874/76‑1 CAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATCTATCA < 2:1111868/76‑1 ATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTT < 1:995625/76‑1 ATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTT < 1:156099/76‑1 ATGTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3021809‑3021732‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatatACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTT > REL606/3022271‑3022344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |