New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2038432 = | 51 (1.030) | 11 (0.250) | 6/134 | 4.6 | 22.1% | coding (517/822 nt) | wbbB | putative glycosyltransferase WbbB |
? | REL606 | 2038941 = | 32 (0.720) | coding (8/822 nt) | wbbB | putative glycosyltransferase WbbB | |||||
Rejected: Coverage evenness skew score above cutoff. |
CTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAA > REL606/2038359‑2038506 | cTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaa > 1:1457133/1‑76 (MQ=255) cTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaa < 1:69047/76‑1 (MQ=255) cTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaa < 1:69062/76‑1 (MQ=255) tACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaaa < 1:1004623/76‑1 (MQ=255) tACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaaa < 2:1548304/76‑1 (MQ=255) aaaTTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAatat < 1:562017/76‑1 (MQ=255) aaaTTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAatat < 1:562033/76‑1 (MQ=255) ctctcAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTgg < 1:1348297/76‑1 (MQ=255) tcAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGaan < 1:11533/76‑2 (MQ=255) tcAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAg > 1:236934/1‑76 (MQ=255) cAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGc < 1:833676/76‑1 (MQ=255) cAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGc < 1:643407/76‑1 (MQ=255) cAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGc < 1:1079275/76‑1 (MQ=255) cAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGc < 1:1079269/76‑1 (MQ=255) cAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGc > 1:538422/1‑76 (MQ=255) gTCGTGATTCAATCTGCATTCCCCATGTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTc < 1:522984/76‑1 (MQ=255) ttCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAg < 2:1587916/76‑1 (MQ=255) cTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTa > 1:148664/1‑76 (MQ=255) tGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTaa < 1:836224/76‑1 (MQ=255) tGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTaa < 2:557897/76‑1 (MQ=255) cATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACa < 1:181719/76‑1 (MQ=255) cATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACa < 1:1100129/76‑1 (MQ=255) cATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACa < 1:61822/76‑1 (MQ=255) tCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAatt < 1:1493210/76‑1 (MQ=255) cATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTAttt < 1:114942/76‑1 (MQ=255) aTTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTAtttt < 2:146937/76‑1 (MQ=255) aTTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTAtttt > 1:6328/1‑76 (MQ=255) ggggTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCa < 2:1116518/76‑1 (MQ=255) ggTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGa < 1:152724/76‑1 (MQ=255) ggTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGa > 1:1112864/1‑76 (MQ=255) aatatcaatatcATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCa > 1:359096/1‑76 (MQ=255) atatcaatatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCAt > 1:1483437/1‑76 (MQ=255) tatcaatatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCAtt > 1:429770/1‑76 (MQ=255) tatcaatatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCAtt > 1:138982/1‑76 (MQ=255) tatcaatatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCAtt > 1:429718/1‑76 (MQ=255) tatcaatatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCAtt > 1:429744/1‑76 (MQ=255) tatcaatatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCAtt > 1:429752/1‑76 (MQ=255) caatatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATttat > 1:194018/1‑76 (MQ=255) atatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATttatta < 1:147741/76‑1 (MQ=255) tatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAg > 1:863475/1‑76 (MQ=255) tatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAg > 1:863488/1‑76 (MQ=255) tcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCa > 1:1525078/1‑76 (MQ=255) tcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCa > 1:1525059/1‑76 (MQ=255) tcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCa > 1:1525060/1‑76 (MQ=255) tACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTCTTCATTTATTAGCATACa > 2:1512454/1‑76 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:1333344/76‑1 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:1289847/76‑1 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:1318128/76‑1 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:527746/76‑1 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:527775/76‑1 (MQ=255) cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa < 1:527763/76‑1 (MQ=255) | CTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAA > REL606/2038359‑2038506 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |