| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2038724 = | 23 (0.460) | 12 (0.270) | 6/134 | 4.6 | 24.6% | coding (225/822 nt) | wbbB | putative glycosyltransferase WbbB |
| ? | REL606 | 2039214 = | 53 (1.200) | coding (481/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TGCATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGA > REL606/2038649‑2038790 | tGCATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTAtcttct < 1:451678/76‑1 (MQ=255) cATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaa < 2:1483437/76‑1 (MQ=255) cATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaa > 1:47090/1‑76 (MQ=255) aaTGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATtccttcct > 1:1157168/1‑76 (MQ=255) aTGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTccttcctt < 1:867359/76‑1 (MQ=255) aTCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCT‑‑AAAATCTATTCCTTCCTTATAGGc < 1:1408292/76‑1 (MQ=255) ttCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAg < 1:1554656/76‑1 (MQ=255) cAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGaa < 1:7952/76‑1 (MQ=255) tGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTc > 1:1331504/1‑76 (MQ=255) tGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTc > 1:1331513/1‑76 (MQ=255) gagaATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCa < 1:1221251/76‑1 (MQ=255) gTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAgaga < 1:453234/76‑1 (MQ=255) cTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAAtt < 2:1456809/76‑1 (MQ=255) tCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAAttt > 1:909041/1‑76 (MQ=255) ccTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTg > 2:1329647/1‑76 (MQ=255) tGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGtn < 1:222904/76‑2 (MQ=255) tGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGtn < 1:222897/76‑2 (MQ=255) aTGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTccc > 1:528253/1‑76 (MQ=255) tGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGata > 1:1211929/1‑76 (MQ=255) tGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGata > 1:1211909/1‑76 (MQ=255) tGAGCTATCTTCTAAAAAAACTATTCCTTCCTTATAGGCAGAAAACCCAAAAAAAAAATTTGTCCCCTTTTCCata > 1:885465/1‑76 (MQ=255) aGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATg > 1:1516641/1‑76 (MQ=255) gCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGa < 1:1512454/76‑1 (MQ=255) | TGCATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGA > REL606/2038649‑2038790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |