| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3582455 = | 68 (1.370) | 7 (0.150) | 5/138 | 5.1 | 9.2% | coding (475/1224 nt) | yhiS | hypothetical protein |
| ? | REL606 | 3582988 = | 76 (1.670) | coding (1008/1224 nt) | yhiS | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATA > REL606/3582380‑3582530 | gTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCa > 1:881054/1‑76 (MQ=255) tATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAgt > 1:1012771/1‑76 (MQ=255) tATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAgt > 2:1157712/1‑76 (MQ=255) tATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAgt > 1:1012760/1‑76 (MQ=255) tATCGCTAATCCTAAACCCGACAAGACAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAgt > 2:890573/1‑76 (MQ=255) tCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAgtgt > 2:97292/1‑76 (MQ=255) tCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAgtgt > 1:344242/1‑76 (MQ=255) cTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCa < 1:1557000/76‑1 (MQ=255) tAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCaa > 1:1083417/1‑76 (MQ=255) tAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCaa < 2:1455273/76‑1 (MQ=255) aaTCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCaaa > 1:1315701/1‑76 (MQ=255) ccTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCa > 2:987025/1‑76 (MQ=255) cTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCAt < 1:988145/76‑1 (MQ=255) cTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCAt > 2:1316543/1‑76 (MQ=255) tAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATg > 2:702608/1‑76 (MQ=255) tAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATg < 1:395576/76‑1 (MQ=255) tAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATg < 2:487922/76‑1 (MQ=255) aaaCCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGt > 1:1491047/1‑76 (MQ=255) aaCCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGtt > 2:460619/1‑76 (MQ=255) cccGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGtttt < 2:1114822/76‑1 (MQ=255) ccGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTc > 1:1474363/1‑76 (MQ=255) ccGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTc > 1:1474349/1‑76 (MQ=255) cGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCa < 2:193403/76‑1 (MQ=255) gACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAg < 1:282724/76‑1 (MQ=255) cAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGAt > 2:382291/1‑76 (MQ=255) cAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTaa > 1:257230/1‑76 (MQ=255) cAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTaa < 1:227582/76‑1 (MQ=255) cATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAAtttt < 2:643645/76‑1 (MQ=255) tAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAt > 1:743174/1‑76 (MQ=255) aaCTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAtt < 1:955630/76‑1 (MQ=255) aCTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTg < 1:485423/76‑1 (MQ=255) aaagTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTg > 1:1090941/1‑76 (MQ=255) aaaaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTg > 2:196140/1‑76 (MQ=255) aaaaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTg > 2:196130/1‑76 (MQ=255) aaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaa > 2:998763/1‑76 (MQ=255) aaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaa > 1:834134/1‑76 (MQ=255) ttAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaaca < 1:1048165/76‑1 (MQ=255) aGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaacaac < 1:368359/76‑1 (MQ=255) aGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaacaac < 1:368375/76‑1 (MQ=255) gCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACg < 2:1426807/76‑1 (MQ=255) gTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAg < 1:930228/76‑1 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt > 1:1284831/1‑76 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt < 1:739894/76‑1 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt > 1:296640/1‑76 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt > 1:296649/1‑76 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt > 1:874822/1‑76 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt > 1:554872/1‑76 (MQ=255) aagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGa < 1:829541/76‑1 (MQ=255) aagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGa > 1:788871/1‑76 (MQ=255) agGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACtt > 2:171389/1‑76 (MQ=255) agGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACtt < 2:188838/76‑1 (MQ=255) agGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACtt > 2:1370129/1‑76 (MQ=255) agGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACtt > 1:554961/1‑76 (MQ=255) agGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACtt < 2:14522/76‑1 (MQ=255) gggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTa < 2:1032216/76‑1 (MQ=255) aaTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCa > 1:93125/1‑76 (MQ=255) aTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCaa > 2:228612/1‑76 (MQ=255) tACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAAc > 2:71037/1‑76 (MQ=255) tACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAAc > 1:1513583/1‑76 (MQ=255) ccATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTaa < 1:386239/76‑1 (MQ=255) aTAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAata > 2:674942/1‑76 (MQ=255) aaaCATGCAGTTTCCAAACCATGTTTTCAGATACTAATTTTATGGCGGAACAACGAGCTGACTTACCAACTAatat < 1:143044/75‑1 (MQ=255) cATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATaaa > 2:1445974/1‑76 (MQ=255) cATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATaaa > 2:1259420/1‑76 (MQ=255) cATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATaaa < 1:605525/76‑1 (MQ=255) ttCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAg < 1:1026792/76‑1 (MQ=255) tCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGa > 2:283288/1‑76 (MQ=255) cAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGat < 1:1066805/76‑1 (MQ=255) aGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGata > 2:1211374/1‑76 (MQ=255) aGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGata < 1:337209/76‑1 (MQ=255) aGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGata > 2:1216374/1‑76 (MQ=255) | GTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATA > REL606/3582380‑3582530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |