| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3704345 = | 79 (1.520) | 11 (0.230) | 7/138 | 4.3 | 12.9% | intergenic (+1013/+591) | yibG/yibH | hypothetical protein/hypothetical protein |
| ? | REL606 | 3704544 = | 76 (1.590) | intergenic (+1212/+392) | yibG/yibH | hypothetical protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGATCATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATAAAATTGA > REL606/3704271‑3704420 | aGATCATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTaaataaaat > 2:880274/1‑76 (MQ=255) gATCATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTaaataaaata > 1:1219659/1‑76 (MQ=255) tCATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAataaaataaa > 1:1100289/1‑76 (MQ=255) cATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAAtaaaataaaa < 2:1482993/76‑1 (MQ=255) cATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAAtaaaataaaa < 1:1274293/76‑1 (MQ=255) aTAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAg < 1:599218/76‑1 (MQ=255) aTAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAg > 1:221482/1‑76 (MQ=255) aTAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAg < 2:341184/76‑1 (MQ=255) aTAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAg < 2:1241456/76‑1 (MQ=255) tAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGa > 2:1566395/1‑76 (MQ=255) tAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGa > 1:978046/1‑76 (MQ=255) aaGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGAt > 2:1519777/1‑76 (MQ=255) aaGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGAt < 1:27881/76‑1 (MQ=255) aGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATa < 1:338926/76‑1 (MQ=255) aGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATa < 2:657350/76‑1 (MQ=255) aGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATa < 2:675178/76‑1 (MQ=255) aGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATa < 1:1639571/76‑1 (MQ=255) aGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATa < 1:1152602/76‑1 (MQ=255) aCCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAg < 1:1119691/76‑1 (MQ=255) aCCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAg < 1:1119709/76‑1 (MQ=255) ccATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGa > 1:18899/1‑76 (MQ=255) gatatCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGaa > 2:1532036/2‑76 (MQ=255) cATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGaa > 1:221033/1‑76 (MQ=255) atatCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAAt < 1:961560/76‑1 (MQ=255) tatCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATa > 1:1579429/1‑76 (MQ=255) atCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATaa > 2:94363/1‑76 (MQ=255) atCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATaa < 1:1582259/76‑1 (MQ=255) atCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATaa > 2:94342/1‑76 (MQ=255) atCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATaa > 1:1472444/1‑76 (MQ=255) aaTCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCa < 1:42705/76‑1 (MQ=255) cTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTg > 1:629867/1‑76 (MQ=255) aaaTCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGat > 2:1257571/1‑76 (MQ=255) aaaTCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGat > 2:562856/1‑76 (MQ=255) tCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGatatn < 1:1665944/76‑2 (MQ=255) ccACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATaa > 2:1274238/1‑76 (MQ=255) ccACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATaa > 1:1540302/1‑76 (MQ=255) ccACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATaa > 2:1080968/1‑76 (MQ=255) ccACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATaa > 2:1080947/1‑76 (MQ=255) ccACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATaa > 1:225189/1‑76 (MQ=255) cTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTa > 1:317640/1‑76 (MQ=255) cTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTa < 1:67895/76‑1 (MQ=255) cTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTa < 2:1190311/76‑1 (MQ=255) ttGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTaa < 1:1365638/76‑1 (MQ=255) tGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAat > 1:436185/1‑76 (MQ=255) gATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTa > 1:1009272/1‑76 (MQ=255) gATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTa < 2:765601/76‑1 (MQ=255) gATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTa < 2:765585/76‑1 (MQ=255) aTTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAg < 2:148839/76‑1 (MQ=255) tGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGtg > 1:85508/1‑76 (MQ=255) tGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGtg < 2:84752/76‑1 (MQ=255) gCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGtga > 2:1332923/1‑76 (MQ=255) cATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGtgat < 1:407878/76‑1 (MQ=255) cATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGtgat < 1:368166/76‑1 (MQ=255) aTTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGtgatg < 1:857920/76‑1 (MQ=255) aTTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGtgatg > 2:176029/1‑76 (MQ=255) aTTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGtgatg < 1:879707/76‑1 (MQ=255) tGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTgatgat < 1:701237/76‑1 (MQ=255) tGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTgatgat > 1:492693/1‑76 (MQ=255) tGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTgatgat > 1:574526/1‑76 (MQ=255) aaaCAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATaa < 2:92598/76‑1 (MQ=255) aaCAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATaaa > 1:1181378/1‑76 (MQ=255) aaCAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATaaa > 2:274775/1‑76 (MQ=255) aGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATaaacca < 2:854220/76‑4 (MQ=255) aGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATaaacca < 2:854217/76‑4 (MQ=255) gTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAata < 1:178541/76‑1 (MQ=255) taaataaaATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAatat < 1:986168/76‑1 (MQ=255) aaataaaataAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAAtata < 2:303672/76‑1 (MQ=255) aaataaaataAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAAtata > 1:419464/1‑76 (MQ=255) aaataaaataAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAAtata < 1:1518396/76‑1 (MQ=255) aaataaaataAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAAtata < 2:1180504/76‑1 (MQ=255) aataaaataaAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATaa < 2:1438888/76‑1 (MQ=255) aataaaataaAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATaa < 2:1579429/76‑1 (MQ=255) ataaaataaaAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATaaa < 1:1192003/76‑1 (MQ=255) taaaataaaaGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATaaaa < 1:1053360/76‑1 (MQ=255) taaaataaaaGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATaaaa < 1:1053344/76‑1 (MQ=255) taaaataaaaGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATaaaa < 2:877141/76‑1 (MQ=255) aaaataaaaGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATAAAAt > 2:62290/1‑76 (MQ=255) aataaaaGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATAAAATTg < 1:1154080/76‑1 (MQ=255) aataaaaGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATAAAATTg < 2:206669/76‑1 (MQ=255) ataaaaGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATAAAATTga > 2:579738/1‑76 (MQ=255) | AGATCATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATAAAATTGA > REL606/3704271‑3704420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |