| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 799063 | 81 (1.560) | 11 (0.240) | 5/132 | 4.9 | 14.9% | coding (213/1146 nt) | ECB_00739 | hypothetical protein |
| ? | REL606 | = 799605 | 54 (1.180) | intergenic (‑330/+454) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAATATATCA > REL606/798988‑799138 | aGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATtgagaat > 2:1488114/1‑76 (MQ=255) gtgtTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATtgagaatg < 1:577779/76‑1 (MQ=255) tgtTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATtgagaatga > 1:859202/1‑76 (MQ=255) ttatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGt < 1:413569/76‑1 (MQ=255) ttatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGt > 1:508784/1‑76 (MQ=255) ttatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGt < 1:948149/76‑1 (MQ=255) tatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTa < 2:335169/76‑1 (MQ=255) tatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTa > 2:849624/1‑76 (MQ=255) tatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTa > 1:1345343/1‑76 (MQ=255) tatGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTa < 2:335187/76‑1 (MQ=255) tGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATc > 2:1579006/1‑76 (MQ=255) tAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCAt > 2:1618913/1‑76 (MQ=255) tAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCAt > 1:1192492/1‑76 (MQ=255) tAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCAt > 1:112775/1‑76 (MQ=255) aaTACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCAtt < 1:408243/76‑1 (MQ=255) aaTACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAAAAAGTATCAtt > 2:301148/1‑76 (MQ=255) tggaaCAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAActtc > 1:1135262/4‑76 (MQ=255) tGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAActtc > 1:1135272/1‑76 (MQ=255) tGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAActtc > 1:1663219/1‑76 (MQ=255) tGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAActtc > 1:1663214/1‑76 (MQ=255) tGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTCAGAATGAGAAAGTATCATTAActtc > 1:1135287/1‑76 (MQ=255) tGCAACAGCATGTGATTAGTAATGGGTATATTCTAAACATTCTTCTAATTGAGAATGAGAAAGTATCATTAActtc > 1:1427148/1‑76 (MQ=255) cAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAActtcct > 2:363726/1‑76 (MQ=255) cAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAActtcct > 2:1213446/1‑76 (MQ=255) tgtgATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTtctttctt > 2:917649/1‑76 (MQ=255) tgtgATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTtctttctt < 2:1189483/76‑1 (MQ=255) gATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCttgtt > 1:411897/1‑76 (MQ=255) gATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCttgtt > 1:411915/1‑76 (MQ=255) gATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCttgtt > 1:1486688/1‑76 (MQ=255) gATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCATTCTTTCttgtt > 1:1486706/1‑76 (MQ=255) gATTAGTAATGGGTATATTCCAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTATCTTCCTTCTTTCttgtt > 1:411898/1‑76 (MQ=255) aTTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCttgttg < 1:1650095/76‑1 (MQ=255) aGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGt > 1:1196912/1‑76 (MQ=255) aGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGt > 1:1196925/1‑76 (MQ=255) gTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGta < 2:1495447/76‑1 (MQ=255) gTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGta > 2:1642672/1‑76 (MQ=255) gTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGta > 1:426445/1‑76 (MQ=255) tAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGtat < 1:1549268/76‑1 (MQ=255) tGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACg > 2:394086/1‑76 (MQ=255) gggTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACga > 1:413574/1‑76 (MQ=255) ggTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgat < 1:439542/76‑1 (MQ=255) ggTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgat < 1:477083/76‑1 (MQ=255) ggTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgat < 1:429705/76‑1 (MQ=255) ggTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgat < 1:429696/76‑1 (MQ=255) ggTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgat < 1:1626190/76‑1 (MQ=255) ggTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgat < 1:1626206/76‑1 (MQ=255) ggTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAATATCATTAACTTCCTTCTTTCTTGTTGAGTATACgat < 1:477066/76‑1 (MQ=255) gTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgatg > 2:1524675/1‑76 (MQ=255) tataTTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgatga > 1:500958/1‑76 (MQ=255) tataTTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgatga > 1:500967/1‑76 (MQ=255) tataTTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACgatga > 2:1621684/1‑76 (MQ=255) tatTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATa > 2:751889/1‑76 (MQ=255) atTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATaa < 1:1280187/76‑1 (MQ=255) ttCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATaaa > 1:217962/1‑76 (MQ=255) ttCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATaaa > 1:1050276/1‑76 (MQ=255) ttCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATaaa > 1:1050266/1‑76 (MQ=255) ttCTAAATATTATTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATaaa > 1:1050255/1‑76 (MQ=255) ttCTAAATATTATTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATaaa > 1:1050282/1‑76 (MQ=255) cTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATc > 2:998684/1‑76 (MQ=255) cTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATc > 2:1654774/1‑76 (MQ=255) cTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATc > 2:22392/1‑76 (MQ=255) cTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATc > 1:1242182/1‑76 (MQ=255) tAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATcc > 2:175348/1‑76 (MQ=255) aaaTATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCa > 2:990767/1‑76 (MQ=255) aaTATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCAc > 2:215923/1‑76 (MQ=255) atTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTa > 1:1036514/1‑76 (MQ=255) atTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTa < 1:1096153/76‑1 (MQ=255) ttcttcTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTaa > 1:640106/1‑76 (MQ=255) cttctAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAata > 1:253036/1‑76 (MQ=255) cttctAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAata < 1:128368/76‑1 (MQ=255) ctAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATga < 2:1112623/76‑1 (MQ=255) ctAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATga > 1:1651757/1‑76 (MQ=255) tAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATgaa < 1:1294041/76‑1 (MQ=255) aaTTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATgaag > 1:1494595/1‑76 (MQ=255) aTTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATgaaga > 2:310200/1‑76 (MQ=255) aTTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATgaaga > 2:1586287/1‑76 (MQ=255) tgagaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAat > 2:39020/1‑76 (MQ=255) tgagaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAat > 2:832589/1‑76 (MQ=255) gagaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAata < 2:777924/76‑1 (MQ=255) gagaatgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAata > 2:1189958/1‑76 (MQ=255) atgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAATATATc < 2:648137/76‑1 (MQ=255) tgagaaAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAATATATCa < 1:308551/76‑1 (MQ=255) | AGTGTTTATTATGTAATACATGCAACAGCATGTGATTAGTAATGGGTATATTCTAAATATTCTTCTAATTGAGAATGAGAAAGTATCATTAACTTCCTTCTTTCTTGTTGAGTATACGATGATAAATCCACTTAATATGAAGAATATATCA > REL606/798988‑799138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |