New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2038724 = | 32 (0.620) | 12 (0.260) | 6/134 | 4.6 | 22.7% | coding (225/822 nt) | wbbB | putative glycosyltransferase WbbB |
? | REL606 | 2039214 = | 53 (1.150) | coding (481/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
Rejected: Coverage evenness skew score above cutoff. |
CATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCT > REL606/2038651‑2038797 | cATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaa > 1:473132/1‑76 (MQ=255) cATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaa > 1:473105/1‑76 (MQ=255) cATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGc > 2:1308283/1‑76 (MQ=255) tCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGa > 1:741868/1‑76 (MQ=255) aTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAAcn < 1:1194683/76‑2 (MQ=255) aTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACt < 1:911725/76‑1 (MQ=255) aTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACt < 1:1321854/76‑1 (MQ=255) aTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACt < 1:605623/76‑1 (MQ=255) aTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACt < 1:460836/76‑1 (MQ=255) ttGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAag > 1:575515/1‑76 (MQ=255) gTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAgaga > 1:695000/1‑76 (MQ=255) tACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGaa < 1:1245322/76‑1 (MQ=255) tACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGaa < 1:614370/76‑1 (MQ=255) tGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTc > 1:1609344/1‑76 (MQ=255) aTGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTccc > 1:130672/1‑76 (MQ=255) tGGTAATAATGAGCTATCTTCTAAAAAATCTATTTCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCg > 1:864530/1‑76 (MQ=255) gTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGtt > 1:1617122/1‑76 (MQ=255) gTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGtt > 2:1396939/1‑76 (MQ=255) gTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGtt > 1:1453723/1‑76 (MQ=255) taataaTGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGttt > 1:459277/1‑76 (MQ=255) taatGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCg > 1:948351/1‑76 (MQ=255) taatGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCg > 1:875992/1‑76 (MQ=255) atGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGat > 1:430526/1‑76 (MQ=255) atGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGat > 1:696068/1‑76 (MQ=255) atGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGat > 1:1532187/1‑76 (MQ=255) gAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGatat < 1:650711/76‑1 (MQ=255) gAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGatat < 1:1154725/76‑1 (MQ=255) aTCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAAt > 1:1445068/1‑76 (MQ=255) cttctAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATcc > 1:1261971/1‑76 (MQ=255) tctAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCt > 2:1097538/1‑76 (MQ=255) tctAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCt > 2:1097556/1‑76 (MQ=255) tctAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCt > 2:988603/1‑76 (MQ=255) | CATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCT > REL606/2038651‑2038797 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |