| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,305,435 | IS150 (–) +3 bp | coding (803‑805/1461 nt) | cls ← | cardiolipin synthetase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 79 (1.290) | 49/146 | 0.1 | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | = 1305437 | 0 (0.000) | coding (803/1461 nt) | cls | cardiolipin synthetase | |||||
| * | ? | REL606 | 664688 = | NA (NA) | 40 (0.630) | 35/150 | 0.7 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1305435 = | 0 (0.000) | coding (805/1461 nt) | cls | cardiolipin synthetase | |||||
Only 100 of 123 total aligned reads displayed.
GGTGGTGGCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGGTCGA > REL606/1305362‑1305512 | tcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGa < 1:867085‑M2/3‑1 (MQ=255)ggtggtggAGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGa > 2:914787/1‑76 (MQ=255) gtggtgGCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAt < 2:822697‑M2/76‑2 (MQ=255) tggtggGGGCNGGATACGTTTNCCGGTTTCAATCCCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtg < 2:2013650‑M2/76‑3 (MQ=255) aaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATgg < 1:345529‑M2/6‑1 (MQ=255) gtggCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgta > 1:1558561‑M2/1‑72 (MQ=255) gtggCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgta > 2:1606055‑M2/1‑72 (MQ=255) gtggCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgta > 2:1055719‑M2/1‑72 (MQ=255) aagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATggg < 1:784612‑M2/7‑1 (MQ=255) tggCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtac > 1:611557‑M2/1‑71 (MQ=255) ggcggcAGNATAAGTTTTCCGGTTACAATCTCCATGTCGCAGGAATAAATAAGCCCCATCGCGGTGGCGAtgtact > 2:328628‑M2/1‑70 (MQ=255) ggcggcAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtact > 2:889806‑M2/1‑70 (MQ=255) ggcggcAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtact > 2:73460‑M2/1‑70 (MQ=255) cggcAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactga < 2:1977897‑M2/76‑9 (MQ=255) tattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCtt > 2:1136959‑M2/65‑76 (MQ=255) gcAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgacc > 1:2036895‑M2/1‑66 (MQ=255) gcAGAACACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgacc < 1:1900468‑M2/76‑11 (MQ=255) attttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGTGGCCTTc > 1:284657‑M2/64‑76 (MQ=255) aGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgacccc < 2:1090825‑M2/76‑13 (MQ=255) aGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgacccc < 2:1601549‑M2/76‑13 (MQ=255) tggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATa < 1:1478916‑M2/17‑1 (MQ=255) tggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATa < 1:467199‑M2/17‑1 (MQ=255) aaTACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaa < 2:1874024‑M2/76‑15 (MQ=255) aTACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaa > 2:1044473‑M2/1‑61 (MQ=255) tACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaa > 2:1594103‑M2/1‑60 (MQ=255) gctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATAcg > 2:1790312‑M2/58‑76 (MQ=255) ctttgacatatgaggggctattccatttcatcgtccaacaaaatgggtgaagtacaCGTTTGGGCCTTCCATAcgc < 1:23371‑M2/20‑1 (MQ=255) tttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATAcgcg < 1:1130942‑M2/21‑1 (MQ=255) cGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaag > 1:1141425‑M2/1‑58 (MQ=255) ttCCGGTTTCAATCGCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtctactgaccccaaaaagttgg > 1:91973‑M2/1‑54 (MQ=255) tCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttgga < 2:829513‑M2/76‑24 (MQ=255) catattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATc > 1:1652069‑M2/51‑76 (MQ=255) catattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATc < 2:855628‑M2/26‑1 (MQ=255) ccGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaanagttggac > 1:1963868‑M2/1‑52 (MQ=255) ccGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggac > 2:213931‑M2/1‑52 (MQ=255) ccGGTTTCAATCGCCCAGTCGCGGGAATAAATAATCCCCATCGCGGTGGCGAtgttctgaccccaaaaagttggac > 2:157919‑M2/1‑52 (MQ=255) atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCa < 1:630986‑M2/27‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGAt < 1:876353‑M2/30‑1 (MQ=255) gTTTCCCTCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagt < 1:1913464‑M2/76‑28 (MQ=255) tttCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccanaaagttggacagtt > 1:4593‑M2/1‑48 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATc > 2:1708242‑M2/46‑76 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATc > 2:918155‑M2/46‑76 (MQ=255) ttCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagtta < 2:850302‑M2/76‑30 (MQ=255) cAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggncagttaaa > 1:1967581‑M2/1‑45 (MQ=255) cAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaa > 1:1044381‑M2/1‑45 (MQ=255) ggctattccatttcatcgtccaacaaagtgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATc > 1:1824802‑M2/42‑76 (MQ=255) aaTCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaac > 1:1495737‑M2/1‑44 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCAt > 2:1347527‑M2/39‑76 (MQ=255) ctcCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacg > 2:387219‑M2/1‑41 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCAtt < 1:1334477‑M2/39‑1 (MQ=255) attccagttaatcgtcccacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCANCANATCAATCCAtt > 2:311100‑M2/38‑76 (MQ=255) cccAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgag < 2:890731‑M2/76‑38 (MQ=255) cccAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgag > 2:1970981‑M2/1‑39 (MQ=255) ccAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgagg > 1:817474‑M2/1‑38 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGcc > 1:471464‑M2/35‑76 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCt < 2:1232605‑M2/44‑1 (MQ=255) tCGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcata < 2:1506936‑M2/76‑43 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTAc < 1:523927‑M2/46‑1 (MQ=255) cGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatat < 2:1376451‑M2/76‑44 (MQ=255) cGCAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatat < 1:988142‑M2/76‑44 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACg < 2:647691‑M2/47‑1 (MQ=255) cAGGAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatatag < 2:1831742‑M2/76‑46 (MQ=255) ggAATAAATAATNCCNATCGCGGTGGCGAtgtacngacccctaaaagttggacagttaaacacgaggcatataggt > 1:1672007‑M2/1‑29 (MQ=255) ggAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacggggcatataggt > 1:120983‑M2/1‑29 (MQ=255) ggAATAAATAATCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt > 1:1009151‑M2/1‑29 (MQ=255) cgtccaacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCg < 2:707881‑M2/51‑1 (MQ=255) ccaacacagtgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCAt > 1:1891008‑M2/23‑76 (MQ=255) aacaaaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCt < 2:1413691‑M2/56‑1 (MQ=255) ataatCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattc < 2:1069214‑M2/76‑55 (MQ=255) taatCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattcc < 2:1068424‑M2/76‑56 (MQ=255) taatCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattcc < 2:1345494‑M2/76‑56 (MQ=255) aatCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccg < 2:1358114‑M2/76‑57 (MQ=255) aaatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATAGCCCTACGCCCGCATCTTGtt > 2:25637‑M2/17‑76 (MQ=255) tCCCCATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgat < 2:1169737‑M2/76‑59 (MQ=255) aatgggtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGttt < 1:1402233‑M2/61‑1 (MQ=255) ccccATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgata > 2:646272‑M2/1‑17 (MQ=255) ccccATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgata < 1:593650‑M2/76‑60 (MQ=255) cccATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatat < 2:506500‑M2/76‑61 (MQ=255) ccATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatt < 2:634233‑M2/76‑62 (MQ=255) ccATCGCGGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatt < 1:528852‑M2/76‑62 (MQ=255) gtgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGt < 2:358406‑M2/66‑1 (MQ=255) tgcagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTa < 1:1305400‑M2/67‑1 (MQ=255) cagtacaCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGc < 2:1290888‑M2/69‑1 (MQ=255) cgGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattg < 2:1830839‑M2/76‑68 (MQ=255) cgGTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattg > 2:1194684‑M2/1‑9 (MQ=255) ggTGGCGAtgtagtgaccccaaagagttggacagttaaacacgaggcatataggtctgnttccgatattcaattgg > 1:254479‑M2/1‑8 (MQ=255) ggTGGCGAtgtactgaccccaaaaagttggacagttaaacacgatgcatataggtctgattccgatattcaattgg > 2:1963094‑M2/1‑8 (MQ=255) ggTGGCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattgg > 2:549368‑M2/1‑8 (MQ=255) ggCGAtgtactgaccccaaaaagttngtcagttaaagacgaggcatgnaggtctgattccgatattcaattggagt > 1:290353‑M2/1‑5 (MQ=255) ggCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagt > 1:687557‑M2/1‑5 (MQ=255) ggCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagt > 2:278494‑M2/1‑5 (MQ=255) ggCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagt > 1:1354506‑M2/1‑5 (MQ=255) gCGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtc > 1:1485130‑M2/1‑4 (MQ=255) cGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtca < 1:825069‑M2/76‑74 (MQ=255) cGAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtca < 1:1173394‑M2/76‑74 (MQ=255) gAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcag > 1:1037299‑M2/1‑2 (MQ=255) gAtgtactgaccccaaaaagttggacagttaaacacgacgcatataggtctgattccgatattcaattggagtcag > 1:1705381‑M2/1‑2 (MQ=255) gATGGGGCCTGCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGGTCg > 1:1952431/1‑76 (MQ=255) atgtactgnccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcaga < 1:1965855‑M2/76‑76 (MQ=255) atgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcaga > 2:1723514‑M2/1‑1 (MQ=255) | GGTGGTGGCGGCAGAATACGTTTTCCGGTTTCAATCTCCCAGTCGCAGGAATAAATAATCCCCATCGCGGTGGCGATGGGGCCTTCCATACGCGCCATCAGATCAATCCATTGCCCTACGCCCGCATCTTGTTTGAAGTAGCGAGGGTCGA > REL606/1305362‑1305512 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |