New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	2005136 =	73 (1.160)	3 (0.050)	3/134	6.6	3.8%	intergenic (‑1372/‑300)	cobU/yoeA	adenosylcobinamide kinase/adenosylcobinamide‑phosphate guanylyltransferase/b1995(b4582); putative hemine receptor
	?	REL606	2005355 =	85 (1.510)					intergenic (‑1591/‑81)	cobU/yoeA	adenosylcobinamide kinase/adenosylcobinamide‑phosphate guanylyltransferase/b1995(b4582); putative hemine receptor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAGTCGTAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTAATGAGGG  >  REL606/2005280‑2005430                                                                            |                                                                            cAGTCGTAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACaat                                                                             >  2:1737834/1‑76 (MQ=255) cAGTCGTAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACaat                                                                             >  1:1379554/1‑76 (MQ=255)  aGTCGTAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACaata                                                                            <  2:1463198/76‑1 (MQ=255)    tCGTAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGGTGACaataat                                                                          <  1:1517123/76‑1 (MQ=255)     cGTAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAAtt                                                                         >  1:1027773/1‑76 (MQ=255)     cGTAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAAtt                                                                         <  2:871076/76‑1 (MQ=255)     cGTAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAAtt                                                                         <  1:461162/76‑1 (MQ=255)       tAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATtat                                                                       >  2:993676/1‑76 (MQ=255)       tAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATtat                                                                       <  2:601452/76‑1 (MQ=255)       tAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATtat                                                                       >  2:524041/1‑76 (MQ=255)       tAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATtat                                                                       <  2:1956118/76‑1 (MQ=255)       tAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATtat                                                                       <  1:1542687/76‑1 (MQ=255)       tAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATtat                                                                       <  1:1298601/76‑1 (MQ=255)        aaaaTATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATtata                                                                      >  2:1258511/1‑76 (MQ=255)        aaaaTATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATtata                                                                      >  2:894271/1‑76 (MQ=255)        aaaaTATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATtata                                                                      <  1:372747/76‑1 (MQ=255)         aaaTATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAg                                                                     <  2:1170770/76‑1 (MQ=255)         aaaTATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAg                                                                     <  2:1827499/76‑1 (MQ=255)          aaTATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGa                                                                    >  1:1307359/1‑76 (MQ=255)           atatCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAGTGATAGat                                                                   <  1:1896514/76‑1 (MQ=255)           atatCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGat                                                                   >  2:1831447/1‑76 (MQ=255)                tatcAAAAAACATGAATAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATg                                                              >  2:175093/1‑76 (MQ=255)                 atcAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATga                                                             >  1:230324/1‑76 (MQ=255)                  tcAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATgag                                                            <  1:987388/76‑1 (MQ=255)                  tcAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATgag                                                            <  1:351414/76‑1 (MQ=255)                   cAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATgaga                                                           >  2:1034002/1‑76 (MQ=255)                   cAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATgaga                                                           >  2:1605223/1‑76 (MQ=255)                   cAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATgaga                                                           >  2:616688/1‑76 (MQ=255)                    aaaagaCGTCATTAATGTATAGAATGTCTGATCTTTTCTATATATCAACATAACTATAATTATAGATATATGAGaa                                                          <  1:2038573/76‑1 (MQ=255)                    aaaaaaCATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGaa                                                          <  1:1026233/76‑1 (MQ=255)                    aaaaaaCATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGaa                                                          <  1:1420279/76‑1 (MQ=255)                    aaaaaaCATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGaa                                                          >  1:1648714/1‑76 (MQ=255)                     aaaaaCATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAAc                                                         >  1:698792/1‑76 (MQ=255)                     aaaaaCATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAAc                                                         >  1:698764/1‑76 (MQ=255)                     aaaaaCATGATTAAGGTCAAAAATGNTTGATATTGACAATTTATGAAGATGACAATAATTATAGATATATGAGAAc                                                         <  2:136326/76‑1 (MQ=255)                      aaaaCATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACa                                                        >  2:1477751/1‑76 (MQ=255)                        aaCATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATa                                                      <  1:872944/76‑1 (MQ=255)                         aCATGATTAAGGTCAAAAATGTTTGATATTTACAATTTGTGAAGATGACAATAATTATAGATATATGAGAACATaa                                                     <  1:1717704/76‑1 (MQ=255)                         aCATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATaa                                                     <  1:1217430/76‑1 (MQ=255)                         aCATGATTAAGGTCAAAAATGTTTGATATCTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATaa                                                     <  1:1217411/76‑1 (MQ=255)                          cATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATaaa                                                    <  2:1309600/76‑1 (MQ=255)                            tGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATg                                                  <  1:490130/76‑1 (MQ=255)                               ttAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGaaa                                               >  1:1053994/1‑76 (MQ=255)                                 aaGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAaat                                             >  1:647108/1‑76 (MQ=255)                                  aGGTCAAAAATGTTTGATATTTACAATTTATGAAGATTACAATAATTATAGATATATGAGAACATAAATGAAaata                                            <  1:1382485/76‑1 (MQ=255)                                  aGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAaata                                            <  1:350186/76‑1 (MQ=255)                                      cAAAAATGTTTGATATTTATAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAGAATAATTa                                        <  2:47244/76‑1 (MQ=255)                                      cAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTa                                        <  1:1822388/76‑1 (MQ=255)                                       aaaaaTGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTAt                                       <  1:996251/76‑1 (MQ=255)                                       aaaaaTGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTAt                                       <  1:996255/76‑1 (MQ=255)                                         aaaTGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCa                                     <  2:678783/76‑1 (MQ=255)                                          aaTGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCAt                                    >  1:962495/1‑76 (MQ=255)                                            tGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTa                                  >  1:561543/1‑76 (MQ=255)                                             gTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTAc                                 <  1:699425/76‑1 (MQ=255)                                              tttGATATTTACAATTTATGAAGATNATAATAATTATAGATATATGCNAACATAAATGAAAATAATTATCATTACa                                <  1:296830/76‑1 (MQ=255)                                              tttGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACa                                <  1:329105/76‑1 (MQ=255)                                               ttGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAg                               >  1:1346184/1‑76 (MQ=255)                                               ttGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAg                               >  2:658298/1‑76 (MQ=255)                                               ttGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAg                               <  2:1422662/76‑1 (MQ=255)                                               ttGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAg                               <  1:1164617/76‑1 (MQ=255)                                               ttGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAg                               <  1:346571/76‑1 (MQ=255)                                                 gATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCa                             >  1:985123/1‑76 (MQ=255)                                                    atTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATc                          <  1:1690640/76‑1 (MQ=255)                                                    atTAACAATTTATGAAGATGACAATAATTATAGATATACGAGAACATAAATGAAAATAATTATCATTATAGCGAta                          >  2:1982879/1‑75 (MQ=255)                                                     tttACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCa                         <  2:1548542/76‑1 (MQ=255)                                                      ttACAATTTATGAAGATGACAATACTTATAGATATATGAGAACATAAATGAAAGTAGTTATCATTACAGCAATCAt                        >  1:89394/1‑76 (MQ=255)                                                      ttACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCAt                        >  2:438264/1‑76 (MQ=255)                                                       tACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCAtt                       >  1:1335464/1‑76 (MQ=255)                                                       tACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCAtt                       >  2:509672/1‑76 (MQ=255)                                                         cAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTg                     <  1:384580/76‑1 (MQ=255)                                                         cAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTg                     >  2:1529822/1‑76 (MQ=255)                                                          aaTTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGt                    <  2:412575/76‑1 (MQ=255)                                                           aTTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTa                   <  1:419115/76‑1 (MQ=255)                                                             ttATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACt                 >  1:435983/1‑76 (MQ=255)                                                             ttATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACt                 >  1:892298/1‑76 (MQ=255)                                                             ttATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACt                 >  2:479642/1‑76 (MQ=255)                                                              tATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACtt                >  1:993051/1‑76 (MQ=255)                                                              tATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACtt                >  1:1616567/1‑76 (MQ=255)                                                               aTGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACttt               >  2:929386/1‑76 (MQ=255)                                                                tGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTg              <  1:1575869/76‑1 (MQ=255)                                                                tGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTg              <  1:1261194/76‑1 (MQ=255)                                                                tGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTg              >  2:1428282/1‑76 (MQ=255)                                                                  aaGATGACAATAGTTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACCTTGTa            >  2:70211/1‑76 (MQ=255)                                                                  aaGATGACAATACTTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATNATTTGTACTTTGTa            >  1:1755278/1‑76 (MQ=255)                                                                  aaGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTa            >  2:1592727/1‑76 (MQ=255)                                                                    gATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTAtn          <  1:1047724/76‑2 (MQ=255)                                                                     aTGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTa         <  1:649530/76‑1 (MQ=255)                                                                     aTGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTa         <  1:1090774/76‑1 (MQ=255)                                                                     aTGACAATAATGATAGATATATGAGCACATGAGTGAAAATAATTATCATGACAGCAATCATTTATACTTTGTATTa         <  1:25162/76‑1 (MQ=255)                                                                      tGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTaa        <  2:1405458/76‑1 (MQ=255)                                                                        aCAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTNTATTAATg      <  1:1953342/76‑1 (MQ=255)                                                                        aCAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTAATg      <  1:787261/76‑1 (MQ=255)                                                                        aCAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTAATg      <  1:488663/76‑1 (MQ=255)                                                                        aCAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTAATg      <  1:488691/76‑1 (MQ=255)                                                                          aatnatTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTAATGAg    >  1:1844147/1‑76 (MQ=255)                                                                           ataatTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTAATGAgg   <  2:189065/76‑1 (MQ=255)                                                                            taatTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTAATGAggg  <  2:120409/76‑1 (MQ=255)                                                                            taatTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTAATGAggg  <  1:483542/76‑1 (MQ=255)                                                                            taatTATAGATATATGAGAAAATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTAATGAggg  <  1:616689/76‑1 (MQ=255)                                                                            |                                                                            CAGTCGTAAAATATCTATCAAAAAACATGATTAAGGTCAAAAATGTTTGATATTTACAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACTTTGTATTAATGAGGG  >  REL606/2005280‑2005430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.