| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3370476 | 74 (1.510) | 6 (0.140) | 5/134 | 4.5 | 8.3% | intergenic (‑100/+47) | rpsM/rpmJ | 30S ribosomal protein S13/50S ribosomal protein L36 |
| ? | REL606 | = 3370479 | 67 (1.530) | intergenic (‑103/+44) | rpsM/rpmJ | 30S ribosomal protein S13/50S ribosomal protein L36 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TACGTTCCATGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCT > REL606/3370401‑3370551 | tACGTTCCATGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTa < 1:717764/76‑1 (MQ=255) cGTTCCATGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAAt > 1:574312/1‑76 (MQ=255) gTTCCATGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATc > 2:435813/1‑76 (MQ=255) gTTCCATGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATc < 1:1466762/76‑1 (MQ=255) ttCCATGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCt < 2:924778/76‑1 (MQ=255) ttCCATGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCt > 2:772033/1‑76 (MQ=255) ttCCATGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCt < 1:389771/76‑1 (MQ=255) aTGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGcc < 2:552126/76‑1 (MQ=255) aTGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGcc < 2:489229/76‑1 (MQ=255) tGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCa > 1:419591/1‑76 (MQ=255) cTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGc > 1:795138/1‑76 (MQ=255) gAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTc < 1:1458630/76‑1 (MQ=255) aaaaGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCa < 1:188637/76‑1 (MQ=255) aaaaGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCa < 2:684148/76‑1 (MQ=255) aaaaGCCCGTTTTCAAGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCa < 2:684135/76‑1 (MQ=255) aaaGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCaa < 2:1322366/76‑1 (MQ=255) tttttCAGGATACTCAAATGGAAACGCACAGACATAAAAAAGATGGGCTGGCTAATCTAGCCAGCTCAACCCAACt < 2:972719/75‑1 (MQ=255) gTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACt > 1:1103505/1‑76 (MQ=255) gTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACt > 1:1103510/1‑76 (MQ=255) ttttCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACtt > 2:74570/1‑76 (MQ=255) tttCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACttt > 1:407831/1‑76 (MQ=255) tttCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACttt > 2:228462/1‑76 (MQ=255) tCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGc > 2:1182916/1‑76 (MQ=255) cAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCa > 1:458867/1‑76 (MQ=255) tACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGaaa > 2:178085/1‑76 (MQ=255) tACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGaaa > 2:325393/1‑76 (MQ=255) tACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAACCAGCTCAACCCAACTTTGCAAGaaa < 1:174353/76‑1 (MQ=255) aCTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGaaaa > 2:769229/1‑76 (MQ=255) ctaaaaTGAAAACGCAAAGACACACAAAAGATTGGCGGGCTAATCTAGCCGGCTCAACCCAACTTTGCAAGaaaaa < 2:905080/73‑1 (MQ=255) cTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGaaaaa > 1:1462650/1‑76 (MQ=255) cTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGaaaaa > 2:57939/1‑76 (MQ=255) cAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAata > 2:600444/1‑76 (MQ=255) cAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAata > 1:402682/1‑76 (MQ=255) ggAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGa > 2:1099144/1‑76 (MQ=255) aaaCGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGaaa < 2:610701/76‑1 (MQ=255) aaaCGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGaaa < 1:177972/76‑1 (MQ=255) ctcacaGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGaaaaaa > 2:683711/3‑76 (MQ=255) caGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAg > 2:71160/1‑76 (MQ=255) taaaaaaGATGGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTgg < 1:1461247/73‑1 (MQ=255) tACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTgg < 1:13580/76‑1 (MQ=255) aaaaaaGTTTGGGTGGATAACAAACCCCGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGgc < 1:371243/74‑1 (MQ=255) aCAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGgc > 2:461592/1‑76 (MQ=255) aCAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGgc > 2:224763/1‑76 (MQ=255) cAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGgcg > 1:103865/1‑76 (MQ=255) aaGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTg > 2:1554525/1‑76 (MQ=255) aGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGt > 2:687070/1‑76 (MQ=255) gATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGtt > 2:557632/1‑76 (MQ=255) gATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGACTTGGCGCTGtt > 2:1117623/1‑76 (MQ=255) aTTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGttt < 1:436778/76‑1 (MQ=255) aTTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGttt > 2:809170/1‑76 (MQ=255) ttGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTa < 2:580764/76‑1 (MQ=255) tggctggcTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTAt > 1:99743/1‑76 (MQ=255) tggctggcTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTAt > 1:573053/1‑76 (MQ=255) tggctggcTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTAt > 1:573066/1‑76 (MQ=255) tggctggcTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTAt > 2:626810/1‑76 (MQ=255) tggctggcTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTAt > 2:106379/1‑76 (MQ=255) ggcctggatAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTAt < 2:1275985/73‑1 (MQ=255) ggctggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATg < 1:133247/76‑1 (MQ=255) gctggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGc < 2:1302475/76‑1 (MQ=255) ctggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCt > 1:346001/1‑76 (MQ=255) tggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCtt < 2:607600/76‑1 (MQ=255) tggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCtt > 2:829948/1‑76 (MQ=255) tggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCtt > 2:743782/1‑76 (MQ=255) ggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtc < 1:948425/76‑1 (MQ=255) ggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtc > 2:595200/1‑76 (MQ=255) ggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtc > 2:1043717/1‑76 (MQ=255) ggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtc > 2:1052002/1‑76 (MQ=255) ggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtc > 2:447133/1‑76 (MQ=255) ggctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtc > 2:1320409/1‑76 (MQ=255) ggccAATCTAACCCGCTCAACCCCACTTTTCAAAAAAAAAATTCGAAAAAAACAACCTTGGCGCTGTTTTTTCttt > 2:1374786/1‑75 (MQ=255) gctAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtcg > 1:726659/1‑76 (MQ=255) tAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtcggc < 1:914405/76‑1 (MQ=255) tAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtcggc > 1:1405542/1‑76 (MQ=255) aaTCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtcggct > 2:709147/1‑76 (MQ=255) aaTCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTtcggct > 2:85808/1‑76 (MQ=255) | TACGTTCCATGCTGAAAAGCCCGTTTTCAGGATACTCAAATGGAAACGCACAGACATACAAAAGATTGGCTGGCTAATCTAGCCAGCTCAACCCAACTTTGCAAGAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCT > REL606/3370401‑3370551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |