New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	= 1506341	20 (0.420)	8 (0.180)	6/140	4.5	30.0%	intergenic (+203/‑37)	ECB_01417/ydcC	hypothetical protein/hypothetical protein
	?	REL606	= 1506614	NA (NA)					coding (237/792 nt)	ydcC	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

AGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTAT  >  REL606/1506319‑1506415                       |                                                                           aGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAat                       >  1:472934/1‑76 (MQ=32)  gCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAatg                      <  2:88346/76‑1 (MQ=34)   cTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAatga                     <  1:329913/76‑1 (MQ=34)     gTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAatgatg                   <  1:1088978/76‑1 (MQ=34)     gTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAatgatg                   >  1:1339216/1‑76 (MQ=34)     gTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAatgatg                   >  1:1044480/1‑76 (MQ=34)       tttttATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGa                 >  1:609314/1‑76 (MQ=34)        ttttATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGaa                <  1:178769/76‑1 (MQ=34)        ttttATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGaa                <  1:684728/76‑1 (MQ=34)          ttATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACa              <  1:839833/76‑1 (MQ=34)            aTTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACata            <  1:534471/76‑1 (MQ=34)            aTTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACata            <  1:998966/76‑1 (MQ=34)             ttGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACatat           <  2:524414/76‑1 (MQ=34)             ttGCTTATACATGATCAAACACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACatat           <  2:610117/76‑1 (MQ=21)              tGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGTAACATAtt          >  1:259079/1‑76 (MQ=21)              tGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATAtt          >  1:259087/1‑76 (MQ=34)              tGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATAtt          >  1:584597/1‑76 (MQ=34)                 ttATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATATTTCt       >  2:562304/1‑76 (MQ=34)                    taCATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATATTTCtatt    >  2:1332178/1‑76 (MQ=34)                      cATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATATTTCtattat  >  2:1376582/1‑76 (MQ=34)                       |                                                                           AGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTAT  >  REL606/1506319‑1506415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.