| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021732 = | 57 (1.230) | 10 (0.230) | 4/138 | 4.7 | 14.0% | coding (953/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | 3022271 = | 71 (1.670) | coding (414/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3021807‑3021732‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatatACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTT > REL606/3022271‑3022345 GTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATAT < 2:907925/76‑1GTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATAT < 2:336742/76‑1 GCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATcga < 2:1265480/76‑4 AGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGAT < 2:771366/76‑1 AAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAGTGCTGCCGTTTTATAAGAATATACCTGATTTCAAA < 2:455697/76‑1 AAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAA < 2:1183470/76‑1 AAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAA < 2:455680/76‑1 AAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAA < 2:455691/76‑1 GAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATC < 2:81985/76‑1 GAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATC < 2:81958/76‑1 AAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATCTA < 2:319054/76‑1 AAACAAGGCGGAAAGAATACATAGCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATCTA < 2:319041/76‑1 AAACAAGGCGGAAAGAATACATACCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATCTA < 2:319060/76‑1 tgcATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAAT > 1:1476241/4‑76 GAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATT > 1:827594/1‑76 TATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGT > 2:22546/1‑76 TACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTT > 1:47042/1‑76 GTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3021807‑3021732‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatatACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTT > REL606/3022271‑3022345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |