New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3026635 = | 60 (1.290) | 5 (0.130) | 5/128 | 4.0 | 7.9% | coding (168/1377 nt) | ECB_02826 | hypothetical protein |
? | REL606 | 3026802 = | 65 (1.650) | coding (1/1377 nt) | ECB_02826 | hypothetical protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
AGAAAAGACGTGGGGATACAATAAAAGACTCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGTTTCAAAAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3026720‑3026635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcaaaaacaATTAATGCTTTAAAATATGAATGCATAAAATATTTTTATCTTAAGATGTGACATCTAATAAAAATACCATTACA > REL606/3026802‑3026875 AGAAAAGACGTGGGGATACAATAAAAGACTCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGT < 1:925211/76‑1 AGAAAAGACGTGGGGATACAATAAAAGACTCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGT > 2:403158/1‑76 GAAAAGACGTGGGGATACAATAAAAGACTCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGTT < 1:860886/76‑1 AAAAGACGTGGGGATACAATAAAAGACTCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGTTT > 2:490777/1‑76 TACAATAAAAGACTCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGTTTCAAAAACAATTAAT < 2:481974/76‑1 ACAATAAAAGACGCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGTTTCAAAAACAATTAATG < 2:1371534/76‑1 AAAGACTCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGTTTCAAAAACAATTAATGCTTTAA < 2:197959/76‑1 ACTCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGTTTCAAAAACAATTAATGCTTTAAAATA < 2:1243210/76‑1 CTCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGTTTCAAAAACAATTAATGCTTTAAAATAT < 2:575692/76‑1 TCAAAAACAATTAATGCTTTAAAATATGAATGCATAAAATATTTTTATCTTAAGATGTGACATCTAATAAAAATAC > 2:816427/1‑76 CAATTAATGCTTTAAAATATGAATGCATAAAATATTTTTATCTTAAGATGTGACATCTAATAAAAATACCATTACA < 2:431064/76‑1 CAATTAATGCTTTAAAATATAAATGCATAAAATATTTTTATCTTAAGATGTGACATCTAATAAAAATACCATTACA > 2:703328/1‑76 AGAAAAGACGTGGGGATACAATAAAAGACTCAAATAATAAAAAACAACCTGATAAATCAGAAAAAGTCAATATTGTTTCAAAAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3026720‑3026635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcaaaaacaATTAATGCTTTAAAATATGAATGCATAAAATATTTTTATCTTAAGATGTGACATCTAATAAAAATACCATTACA > REL606/3026802‑3026875 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |