| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2038439 | 66 (1.170) | 5 (0.100) | 4/134 | 5.2 | 7.6% | coding (510/822 nt) | wbbB | putative glycosyltransferase WbbB |
| ? | REL606 | = 2038932 | 63 (1.250) | coding (17/822 nt) | wbbB | putative glycosyltransferase WbbB | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2038363‑2038439‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaaaaaaAATTATGCATTGTGGCCTGTTCTTATACTTTAAAGCCAGAATTCATAATTAATAAATTATATAATTATTTAC < REL606/2038932‑2038861 GAATGAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAA < 1:163105/76‑1GAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAA < 1:1008837/76‑1GAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAA < 1:1008843/76‑1 AATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAA < 2:61968/76‑1 TCAATAATATCAATATCATTACTAAAAAAAAATTATGCATTGTGGCCTGTTCTTATACTTTAAAGCCAGAATTCAT > 2:341115/1‑76 ATATCAATATCATTACTAAAAAAAAATTATGCATTGTGGCCTGTTCTTATACTTTAAAGCCAGAATTCATAATTAA > 2:1211952/1‑76 ATATCAATATCATTACTAAAAAAAAATTATGCATTGTGGCCTGTTCTTATACTTTAAAGCCAGAATTCATAATTAA > 2:1211986/1‑76 TATCATTACTAAAAAAAAATTATCCATTGTGGCCTGTTCTTATACTTTAAAGCCAGAATTCATAATTAATAAATTA > 2:257109/1‑76 TCATTACTAAAAAAAAATTATGCATTGTGGCCTGTTCTTATACTTTAAAGCCAGAATTCATAATTAATAAATTATA > 2:1212495/1‑76 AAAAAAATTATGCATTGTGGCCTGTTCTTATACTTTAAAGCCAGAATTCATAATTAATAAATTATATAATTATTTA < 2:471605/76‑1 AAAAAAATTATGCATTGTGGCCTGTTCTTATACTTTAAAGCCAGAATTCATAATTAATAAATTATATAATTATTTA < 2:887580/76‑1 AAAAAATTATGCATTGTGGCCTGTTCTTATACTTTAAAGCCAGAATTCATAATTAATAAATTATATAATTATTTAC > 1:482269/1‑76 GAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2038363‑2038439‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaaaaaaAATTATGCATTGTGGCCTGTTCTTATACTTTAAAGCCAGAATTCATAATTAATAAATTATATAATTATTTAC < REL606/2038932‑2038861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |