| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3021607 | 118 (2.080) | 5 (0.100) | 4/138 | 5.3 | 5.1% | coding (1078/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | = 3022022 | 76 (1.460) | coding (663/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 122 total aligned reads displayed.
CAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCAATTAT > REL606/3021532‑3021679 | caacaaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAg < 1:639513/76‑1 (MQ=255)caacaaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAg < 2:172169/76‑1 (MQ=255)caacaaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAACTACATAg > 2:1486311/1‑76 (MQ=255) aacaaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGc < 1:1042769/76‑1 (MQ=255) caaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCa < 1:42971/76‑1 (MQ=255) aaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCAt > 1:927286/1‑76 (MQ=255) aGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCAta < 1:1013309/76‑2 (MQ=255) gAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTg > 1:385177/1‑76 (MQ=255) gAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTg < 2:786531/76‑1 (MQ=255) gAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTg < 1:1275787/76‑1 (MQ=255) gAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTg > 1:1244904/1‑76 (MQ=255) atatTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTa < 1:1629811/76‑1 (MQ=255) atatTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGACATTGTa < 1:1006396/76‑1 (MQ=255) tatTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTAt > 1:539387/1‑76 (MQ=255) tatTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTAt > 1:539376/1‑76 (MQ=255) tatTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTAt > 1:321411/1‑76 (MQ=255) atTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTAGATAGCCATTGTAtt < 1:224075/76‑1 (MQ=255) atTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTAtt < 1:224052/76‑1 (MQ=255) tttAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATtct > 2:1133370/1‑76 (MQ=255) tttAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATtct > 1:93630/1‑76 (MQ=255) tAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATtctct < 2:770257/76‑1 (MQ=255) tAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATtctct < 2:347059/76‑1 (MQ=255) aaTATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATtctctc < 2:1236740/76‑1 (MQ=255) tatatTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAg < 1:1590479/76‑1 (MQ=255) tatatTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAg > 1:1766868/1‑76 (MQ=255) tatatTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAg > 1:443283/1‑76 (MQ=255) atatTGACTCTAGGAGTTTTGTCTTTATTTTCTTAGCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGa > 2:1626618/1‑76 (MQ=255) atatTGACTCTAGGAGTTTTGTCTTTATTTTCTTAGCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGa > 2:1626634/1‑76 (MQ=255) atTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAat > 1:390338/1‑76 (MQ=255) ttGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAata < 2:1423109/76‑1 (MQ=255) ttGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAata > 2:495594/1‑76 (MQ=255) tctAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAAtatgttt < 2:1400220/76‑1 (MQ=255) ctAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAAtatgtttt > 1:563733/1‑76 (MQ=255) ctAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATCGTATTCTCTCAGAAtatgtttt > 2:1688711/1‑76 (MQ=255) aGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAAtatgttttat > 1:311482/1‑76 (MQ=255) ggAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAAtatgttttatg < 1:1280924/76‑1 (MQ=255) ggAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAAtatgttttatg < 1:1280939/76‑1 (MQ=255) gAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAAtatgttttatgt > 1:408033/1‑76 (MQ=255) aGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAAtatgttttatgtt > 1:215707/1‑76 (MQ=255) ggtttGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAAtatgttttatgttt > 1:1575749/3‑76 (MQ=255) gTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAAtatgttttatgttt < 2:1471115/76‑1 (MQ=255) ttttGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATatgttttatgtttt > 1:38515/1‑76 (MQ=255) tttGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATAtgttttatgtttta < 2:430487/76‑1 (MQ=255) tttGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATAtgttttatgtttta > 1:70044/1‑76 (MQ=255) tttGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATAtgttttatgtttta > 2:634123/1‑76 (MQ=255) ttGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTaa < 1:113467/76‑1 (MQ=255) ttGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTaa > 1:1602553/1‑76 (MQ=255) ttGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTaa < 1:113487/76‑1 (MQ=255) ttGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTaa > 1:642722/1‑76 (MQ=255) tGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAAc > 1:1048839/1‑76 (MQ=255) tCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCATAATATGTTTTATGTTTTAACGt < 2:1708504/76‑1 (MQ=255) tCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGt < 1:1785636/76‑1 (MQ=255) tCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGt < 1:1785647/76‑1 (MQ=255) gttttATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGt > 2:647241/3‑76 (MQ=255) cTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTa < 1:1343120/76‑1 (MQ=255) ttATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAgg < 2:326833/76‑1 (MQ=255) ttATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAgg < 1:1352727/76‑1 (MQ=255) tATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGc < 2:445556/76‑1 (MQ=255) aTTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCa > 1:1007454/1‑76 (MQ=255) ttttCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAg < 1:170656/76‑1 (MQ=255) ttCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAggg > 1:1354329/1‑76 (MQ=255) ttCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAggg > 1:513294/1‑76 (MQ=255) tCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGa > 1:1068703/1‑76 (MQ=255) cTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGaa > 1:1592510/1‑76 (MQ=255) ttATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAAt > 2:792886/1‑76 (MQ=255) ttATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAAt > 2:1677694/1‑76 (MQ=255) tATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATa > 1:1199295/1‑76 (MQ=255) aTCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATaa > 1:115680/1‑76 (MQ=255) aTCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATaa > 1:160153/1‑76 (MQ=255) cTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGa < 1:1410690/76‑1 (MQ=255) ttCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGat < 1:332940/76‑1 (MQ=255) ttCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGat > 1:1397465/1‑76 (MQ=255) ttCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGat > 1:1397474/1‑76 (MQ=255) ttCATACACATAAGTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGat < 1:632115/76‑1 (MQ=255) tCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGata > 2:1491587/1‑76 (MQ=255) cATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGatat > 1:821706/1‑76 (MQ=255) cATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGatat > 1:243077/1‑76 (MQ=255) cATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGatat > 1:175510/1‑76 (MQ=255) cATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGatat < 1:850398/76‑1 (MQ=255) cATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGatat > 1:219725/1‑76 (MQ=255) cATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGatat < 1:171186/76‑1 (MQ=255) aTACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATc < 2:738756/76‑1 (MQ=255) tACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCa < 2:337792/76‑1 (MQ=255) cacaTAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATg > 1:1111501/1‑76 (MQ=255) acaTAATTACATAGCCATTGTATTCTCTTAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGt < 2:226951/76‑1 (MQ=255) acaTAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGt < 2:1520009/76‑1 (MQ=255) naTTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATc > 1:1410708/2‑76 (MQ=255) aaTTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATc < 1:920741/76‑1 (MQ=255) aaTTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATc > 2:419856/1‑76 (MQ=255) aaTTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATc > 1:1761391/1‑76 (MQ=255) aTTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCa > 2:1640470/1‑76 (MQ=255) aTTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCa < 2:1258822/76‑1 (MQ=255) aTTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCa < 1:1133370/76‑1 (MQ=255) aTTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCa < 1:1778660/76‑1 (MQ=255) aTTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCa > 2:1689787/1‑76 (MQ=255) ttACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCaa < 1:1285225/76‑1 (MQ=255) ttACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCaa > 1:1335373/1‑76 (MQ=255) ttACATAGCCATTGTATTCTCTCAGAATACGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCaa < 1:1285197/76‑1 (MQ=255) tACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCAAt < 1:1291316/76‑1 (MQ=255) aTAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCAATtat < 1:33692/76‑1 (MQ=255) | CAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCTCAGAATATGTTTTATGTTTTAACGTAGGCAGGGAATAAGATATCATGTAATCAATTAT > REL606/3021532‑3021679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |