| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021732 = | 106 (1.870) | 6 (0.120) | 4/138 | 5.3 | 5.8% | coding (953/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | 3022271 = | 99 (1.900) | coding (414/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 110 total aligned reads displayed.
AAAAATATTGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTTA > REL606/3022196‑3022346 | aaaaaTATTGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAAtata < 1:544100/76‑1 (MQ=255)aaaaaTATTGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAAtata < 2:149405/76‑1 (MQ=255) aaTATTGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCt < 1:1221287/76‑1 (MQ=255) aaTATTGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCt < 1:748596/76‑1 (MQ=255) atatTGCTACCGATNAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTg > 1:997156/1‑76 (MQ=255) tatTGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGa > 2:1312511/1‑76 (MQ=255) ttGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGAtt > 1:1352684/1‑76 (MQ=255) tGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGAttt < 1:402236/76‑1 (MQ=255) tGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGAttt > 1:596246/1‑76 (MQ=255) tGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATACCGTACTGAGTGAATATACCTGAttt > 2:781524/1‑76 (MQ=255) gCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTc < 1:446042/76‑1 (MQ=255) gCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTc < 2:252881/76‑1 (MQ=255) cTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCa > 1:139267/1‑76 (MQ=255) cTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCa > 1:1806218/1‑76 (MQ=255) cTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCa < 1:1734088/76‑1 (MQ=255) cTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCATACTGAGTGAATATACCTGATTTCa > 2:785072/1‑76 (MQ=255) tACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCaa < 2:614649/76‑1 (MQ=255) aCCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCaaa < 1:824422/76‑1 (MQ=255) aCCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCaaa < 1:1258658/76‑1 (MQ=255) ccGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAat > 2:1017987/1‑76 (MQ=255) ccGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAat < 1:644816/76‑1 (MQ=255) gATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAatan < 1:668978/76‑2 (MQ=255) aTAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatc < 1:7703/76‑1 (MQ=255) aTAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatc < 1:7698/76‑1 (MQ=255) tAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatct < 1:240565/76‑1 (MQ=255) tAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatct < 1:487993/76‑1 (MQ=255) aaaaGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatcta < 1:1073070/76‑1 (MQ=255) aaaaGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatcta < 1:1224825/76‑1 (MQ=255) aaaaGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatcta > 2:507361/1‑76 (MQ=255) aaaGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatctat > 1:1804279/1‑76 (MQ=255) aaaGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatctat > 2:796703/1‑76 (MQ=255) aaGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatctatc < 2:628496/76‑1 (MQ=255) aaGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatctatc < 1:188309/76‑1 (MQ=255) aaGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAAtatctatc < 2:1511061/76‑1 (MQ=255) gTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCaa < 1:1110180/76‑1 (MQ=255) gTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCaa < 1:1110183/76‑1 (MQ=255) cGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTcc > 1:1286927/1‑76 (MQ=255) cGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTcc > 1:1651863/1‑76 (MQ=255) tAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACa < 2:1684592/76‑1 (MQ=255) tAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACa < 1:1813778/76‑1 (MQ=255) tAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACa < 1:516003/76‑1 (MQ=255) tAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACa < 1:1780499/76‑1 (MQ=255) tAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACa > 1:1572456/1‑76 (MQ=255) aaTTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACan < 1:936364/76‑2 (MQ=255) aaTTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACAt > 2:732328/1‑76 (MQ=255) aTTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATc < 1:1619153/76‑1 (MQ=255) ttttAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCa < 1:377612/76‑1 (MQ=255) ttttAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCa < 1:1203857/76‑1 (MQ=255) ttttAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCa < 1:924264/76‑1 (MQ=255) ttttAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCa < 1:691708/76‑1 (MQ=255) ttttAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCa > 1:393176/1‑76 (MQ=255) aGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTg < 2:139267/76‑1 (MQ=255) gCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGa > 2:1667669/1‑76 (MQ=255) cACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGAt > 2:52554/1‑76 (MQ=255) cACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGAt > 2:226170/1‑76 (MQ=255) cTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGt > 1:1186600/1‑76 (MQ=255) cTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGt > 2:430190/1‑76 (MQ=255) cTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGt > 1:527566/1‑76 (MQ=255) cTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGt > 2:1036583/1‑76 (MQ=255) tttCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCACCATCACCTGATGTa > 2:1726189/1‑76 (MQ=255) tttCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTa < 2:1390354/76‑1 (MQ=255) tttCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTa < 2:1390341/76‑1 (MQ=255) ttCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTaa > 1:462709/1‑76 (MQ=255) ttCCCATTGTTGATATCGTACTGAGTGAATATACCCGATTCCAACTATCTATCAACCCCAACATCACCTGCTGTac > 2:587655/1‑75 (MQ=255) cccATTGTTGATATCGTGCTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAAtt < 1:318819/76‑1 (MQ=255) cccATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAAtt > 1:1314653/1‑76 (MQ=255) cccATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAAtt > 2:500805/1‑76 (MQ=255) cccATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAAtt < 2:1546801/76‑1 (MQ=255) cccATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAAtt > 2:500820/1‑76 (MQ=255) ccATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTa < 2:145918/76‑1 (MQ=255) cATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTAc > 1:779978/1‑76 (MQ=255) aTTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACa < 2:239278/76‑1 (MQ=255) aTTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACa < 1:327309/76‑1 (MQ=255) ttgttgATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACAt < 1:323964/76‑1 (MQ=255) ttgttgATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACAt < 1:1133493/76‑1 (MQ=255) tgttgATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATa > 1:1335606/1‑76 (MQ=255) gttgATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTGCATAg < 2:1112835/76‑1 (MQ=255) ttgATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGt < 2:1313584/76‑1 (MQ=255) ttgATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGt > 2:521364/1‑76 (MQ=255) atatCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGt < 2:200354/76‑1 (MQ=255) tCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGa > 1:80336/1‑76 (MQ=255) tCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGa > 1:168823/1‑76 (MQ=255) cGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGAt > 1:1405023/1‑76 (MQ=255) gTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGAtt < 1:1383756/76‑1 (MQ=255) aCTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCt > 1:1138489/1‑76 (MQ=255) cTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCta < 2:253912/76‑1 (MQ=255) tGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCtaa < 1:1329063/76‑1 (MQ=255) gAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCtaat > 1:1581931/1‑76 (MQ=255) gAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCtaat > 1:1581949/1‑76 (MQ=255) tGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTaataat < 1:1408620/76‑1 (MQ=255) aaTATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTg < 2:162171/76‑1 (MQ=255) atatACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTgg < 2:124366/76‑1 (MQ=255) tataCCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGt > 2:1290179/1‑76 (MQ=255) ataCCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGtt > 1:667159/1‑76 (MQ=255) aCCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTTa < 2:1749506/76‑1 (MQ=255) aCCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTTa > 1:1356270/1‑76 (MQ=255) aCCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTTa > 2:103685/1‑76 (MQ=255) aCCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTTa > 1:777652/1‑76 (MQ=255) aCCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTTa < 1:390098/76‑1 (MQ=255) aCCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTTa > 1:777648/1‑76 (MQ=255) | AAAAATATTGCTACCGATAAAAGTATCGCCTAATTTTAGCACTTTCCCATTGTTGATATCGTACTGAGTGAATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTTA > REL606/3022196‑3022346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |