New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2114339 =47 (0.950)5 (0.110) 5/140 4.7 8.5% coding (335/1968 nt) ECB_02001 hypothetical protein
?REL606 2114530 = 64 (1.390)coding (144/1968 nt) ECB_02001 hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATAGAAGTTTATCGTTGTAAGTTTGATGATTTACATAAACACTTTCCGAAAAAATACGCTCCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2114403‑2114339
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctaaAAGATAATTAATAAACTCCAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTA  >  REL606/2114530‑2114602
                                                                                                                                          
ATAGAAGTTTATCGTTGTAAGTTTGATGATTTACATAAACACTTTCCGAAAAAATACGCTCCTAAAAGATAATTAA                                                                <  2:935438/76‑1
   GAAGTTTATCGTTGTAAGTTTGATGATTTACATAAACACTTTCCGAAAAAATACGCTCCTAAAAGATAATTAATAA                                                             <  2:1246464/76‑1
      GTTTATCGTTGTAAGTTTGATGATTTACATAAACACTTTCCGAAAAAATACGCTCCTAAAAGATAATTAATAAACT                                                          <  2:290645/76‑1
             GTTGTAAGTTTGATGATTTACATAAACACTTTCCGAAAAAATACGCTCCTAAAAGATAATTAATAAACTCCAGAAT                                                   <  2:609215/76‑1
              TTGTAAGTTTGATGATTTACATAAACACTTTCCGAAAAAATACGCTCCTAAAAGATAATTAATAAACTCCAGAATA                                                  <  2:210588/76‑1
                                                             CTAAAAGATACTTAATAAACTCCAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTT   <  2:1126150/76‑1
                                                             CTAAAAGATAATTANTAAACTCCAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTT   >  1:873803/1‑76
                                                             CTAAAAGATAATTAATAAACTCCAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTT   >  1:1264731/1‑76
                                                              TAAAAGATAATTAATAAACTCCAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTA  >  2:56717/1‑76
                                                                                                                                          
ATAGAAGTTTATCGTTGTAAGTTTGATGATTTACATAAACACTTTCCGAAAAAATACGCTCCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2114403‑2114339
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctaaAAGATAATTAATAAACTCCAGAATACTTGACTTACCTGTGTCAGAGTCTCCGTAGATAACATTGAGACCTTTA  >  REL606/2114530‑2114602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.