New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	3201814 =	88 (1.780)	7 (0.150)	6/142	4.4	6.9%	coding (366/1104 nt)	yhaC	hypothetical protein
	?	REL606	3202251 =	107 (2.290)					coding (803/1104 nt)	yhaC	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCCAGTCCCACAACTAAAAATTACGTTTAACCTCCTGATTTCATTGTAAATATCTTTTAATGGGCAATTAATATTGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3201892‑3201814 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gataAATTAGAAAATGAATTAACAAAAGAAATATATAAAAGCTCATCGAAAATCAACAATTGCTTGAACAGAATTAAAT  >  REL606/3202251‑3202325                                                                                                                                                            TCCAGTCCCACAACTAAAAATTACGTTTAACCTCCTGATTTCATTGTAAATATCTTTTAATGGGCAATTAATATTG                                                                                <  1:716589/76‑1    AGTCCCACAACTAAAAATTACGTTTAACCTCCTGATTTCATTGTAAATATCTTTTAATGGGCAATTAATATTGATA                                                                             <  1:738489/76‑1                 AAAATTACGTTTAACCTCCTGATTTCATTGTAAATATCTTTTAATGGGCAATTAATATTGATAAATTAGAAAATGA                                                                <  2:1065700/76‑1                  AAATTACGTTTAACCTCCTGATTTCATTGTAAATATCTTTTAATGGGCAATTAATATTGATAAATTAGAAAATGAA                                                               <  2:974023/76‑1                  AAATTACGTTTAACCTCCTGATTTCATTGTAAATATCTTTTAATGGGCAATTAATATTGATAAATTAGAAAATGAA                                                               <  2:974046/76‑1                      TACGTTTAACCTCCTGATTTCATTGTAAATATCTTTTAATGGGCAATTAATATTCATAAATTAGAAAGTGAATTAA                                                           <  2:929649/76‑1                          TTTAACCTCCTGATTTCATTGTAAATATCTTTTAATGGGCAATTAATATTGATAAATTAGAAAATGAATTAACAAA                                                       <  2:378379/76‑1                                   CTGATTTCATTGTAAATATCTTTTAATGGGCAATTAATATTGATAAATTAGAAAATGAATTAACAAAAGAAATATA                                              <  2:965528/76‑1                                       TTTCATTGTAAATAAATTTTAATGGGCAATTAATATTGATAAATTAGAAAATGAATTCACAAAAGAAATATATAAA                                          <  2:1437735/76‑1                                                                            GATAAATTAGAAAATGAATTAACAAAAGAAATATATAAAAGCTCATCGAAAATCAACAATTGCTTGAACAGAATTA     <  1:666124/76‑1                                                                             ATAAATTAGAAAATGAATTAACAAAAGAAATATATAAAAGCTCATCGAAAATCAACAATTGCTTGAACAGAATTAA    <  2:1051147/76‑1                                                                               AAATTAGAAAATGAATTAACAAAAGAAATATATAAAAGCTCATCGAAAATCAACAATTGCTTGAACAGAATTAAAT  >  1:383686/1‑76                                                                                                                                                            TCCAGTCCCACAACTAAAAATTACGTTTAACCTCCTGATTTCATTGTAAATATCTTTTAATGGGCAATTAATATTGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3201892‑3201814 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gataAATTAGAAAATGAATTAACAAAAGAAATATATAAAAGCTCATCGAAAATCAACAATTGCTTGAACAGAATTAAAT  >  REL606/3202251‑3202325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.