| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3738103 = | 90 (1.820) | 6 (0.130) | 5/140 | 4.7 | 7.4% | coding (753/984 nt) | waaV | putative beta1,3‑glucosyltransferase |
| ? | REL606 | 3738435 = | 66 (1.430) | coding (421/984 nt) | waaV | putative beta1,3‑glucosyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACATGAGTCATTTGCGCACGAAAGAATCTACTCTTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3738181‑3738103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcatTAAACTCTGTATTTATAGGTGAGTAAGTAACACCATCTTTTATATAATGGCCATAAAGCCCACAATAAATCGCA > REL606/3738435‑3738508 ACATGAGTCATTTGCGCACGAAAGAATCTACTCTTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATT > 1:1593206/1‑76ACATGAGTCATTTGCGCACGAAAGAATCTACTCTTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATT > 1:418519/1‑76ACATGAGTCATTTGCGCACGAAAGAATCTACTCTTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATT > 1:96053/1‑76 CATGAGTCATTTGCGCACGAAAGAATCTACTCTTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATTC > 2:1299318/1‑76 TTGCGCACGAAAGAATCTACTCTTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATTCATTAAACTCT < 2:1524998/76‑1 TGCGCACGAAAGAATCTACTCTTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATACATTAAACTCTG < 2:904270/76‑1 CACGAAAGAATCTACTCTTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATTCATTAAACTCTGTATT < 2:254048/76‑1 ATCTACTCTTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATTCATTAAACTCTGTATTTATAGGTGA < 2:1570861/76‑1 TTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATTCATTAAACTCTGTATTTATAGGTGAGTAAGTAA < 2:457214/76‑1 TTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATTCATTAAACTCTGTATTTATAGGTGAGTAAGTAA < 2:638206/76‑1 cTCATTAAACTCTGTATTTATAGGTGAGTAAGTAACCCCATCTTTTATATAATGGCCATAAAGCCCACAATAAATC < 1:654117/75‑1 TCATTAAACTCTGTATTTATAGGTGAGTAAGTAACACCATCTTTTATATAATGGCCATAAAGCCCACAATAAATCG > 2:1118331/1‑76 CATCAAACTCTGTATTTATAGGTGAGTAAGTAACACCATCTTTTATATAATGGCCATAAAGCCCACAATAAATCGC > 2:1269612/1‑76 ATTAAACTCTGTATTTATAGGTGAGTAAGTAACACCATCTTTTATATAATGGCCATAAAGCCCACAATAAATCGCA > 2:457617/1‑76 ACATGAGTCATTTGCGCACGAAAGAATCTACTCTTCTGTGATGCAGTTATACAAAGGTAACCGGAAAGAAGAAATTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3738181‑3738103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcatTAAACTCTGTATTTATAGGTGAGTAAGTAACACCATCTTTTATATAATGGCCATAAAGCCCACAATAAATCGCA > REL606/3738435‑3738508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |