| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 799199 = | 109 (2.210) | 7 (0.150) | 5/138 | 4.7 | 6.8% | coding (77/1146 nt) | ECB_00739 | hypothetical protein |
| ? | REL606 | 799388 = | 92 (2.030) | intergenic (‑113/+671) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 110 total aligned reads displayed.
ATGAAGAATATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGATAATATCA > REL606/799124‑799274 | atGAAGAATATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCAt > 1:228156/1‑76 (MQ=255) tGAAGAATATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCAtt > 2:1473412/1‑76 (MQ=255) gaagaaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCAttt > 1:1152883/1‑76 (MQ=255) gaagaaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCAttt < 2:184166/76‑1 (MQ=255) aagaaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTa > 2:698396/1‑76 (MQ=255) aagaaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTa > 2:1413677/1‑76 (MQ=255) agaaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAg > 2:1583437/1‑76 (MQ=255) agaaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAg < 2:756574/76‑1 (MQ=255) agaaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAg > 2:296253/1‑76 (MQ=255) aaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCa < 2:1351936/76‑1 (MQ=255) aaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCa > 2:180378/1‑76 (MQ=255) atatCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGa < 1:1095950/76‑1 (MQ=255) atatCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGa > 1:622662/1‑76 (MQ=255) tatCAACTCCAGACAGCCCATTCCCACATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGaa > 1:457228/1‑76 (MQ=255) tatCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGaa < 2:192872/76‑1 (MQ=255) tatCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGaa > 1:948479/1‑76 (MQ=255) atCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAAt < 2:1364126/76‑1 (MQ=255) cAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCt < 1:1542597/76‑1 (MQ=255) aCTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGa < 1:1205331/76‑1 (MQ=255) cTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGaa > 1:894401/1‑76 (MQ=255) cTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGaa < 2:862620/76‑1 (MQ=255) cTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGaa < 2:862628/76‑1 (MQ=255) tCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGCGAGTAGTGCTCATTTAGCAAGAATCTGTAg > 1:515360/1‑76 (MQ=255) ccAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGt > 1:1314114/1‑76 (MQ=255) ccAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGt > 1:1523241/1‑76 (MQ=255) cAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTg < 2:15812/76‑1 (MQ=255) aGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTgg > 2:1372689/1‑76 (MQ=255) cAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAAt > 1:1291133/1‑76 (MQ=255) aGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATa > 1:1194046/1‑76 (MQ=255) ccATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATaaaa > 2:621002/1‑76 (MQ=255) aTTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAaaca < 1:60222/76‑1 (MQ=255) ttCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAaacaa < 1:607578/76‑1 (MQ=255) ttCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAaacaa > 1:242640/1‑76 (MQ=255) tCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAaacaac > 1:204255/1‑76 (MQ=255) tCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAaacaac < 1:942111/76‑1 (MQ=255) tCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAaacaac > 1:204276/1‑76 (MQ=255) cccAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAacaaca < 2:839609/76‑1 (MQ=255) cccAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAacaaca < 1:882388/76‑1 (MQ=255) ccAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAAcaacaa > 1:511995/1‑76 (MQ=255) aaaTAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAga < 2:1426668/76‑2 (MQ=255) aataatAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGtn < 1:1290240/76‑2 (MQ=255) aataatAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTa < 2:1536553/76‑1 (MQ=255) aataatAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTa < 1:891643/76‑1 (MQ=255) ataataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTaa > 2:253260/1‑76 (MQ=255) ataataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTaa < 2:622662/76‑1 (MQ=255) ataataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTaa > 2:1128000/1‑76 (MQ=255) ataataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTaa < 1:1228772/76‑1 (MQ=255) ataataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTaa < 1:672270/76‑1 (MQ=255) ataataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTaa > 1:795584/1‑76 (MQ=255) taataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAat > 1:1570676/1‑76 (MQ=255) aataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatg < 1:793530/76‑1 (MQ=255) aataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatg > 1:1315069/1‑76 (MQ=255) ataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatga < 2:360351/76‑1 (MQ=255) ataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatga > 1:112941/1‑76 (MQ=255) taGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatgat > 2:1086877/1‑76 (MQ=255) aGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatgatg < 1:1192722/76‑1 (MQ=255) aGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatgatg < 2:119337/76‑1 (MQ=255) ggTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGc > 2:183305/1‑76 (MQ=255) ggTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGc < 1:1565716/76‑1 (MQ=255) gTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCt < 2:1479854/76‑1 (MQ=255) tCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTa > 1:498266/1‑76 (MQ=255) tCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTa > 1:502076/1‑76 (MQ=255) tCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTa > 1:57332/1‑76 (MQ=255) tCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTa > 1:958377/1‑76 (MQ=255) tCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTa > 1:958365/1‑76 (MQ=255) tCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTa > 1:750063/1‑76 (MQ=255) tCACCCAAATCTTTCTGAGAGTAGAGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTa > 1:958387/1‑76 (MQ=255) aCCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTAtt < 2:1499293/76‑1 (MQ=255) aCCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTAtt > 1:1423123/1‑76 (MQ=255) cccAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTc > 1:557075/1‑76 (MQ=255) cccAAATCTGTCTGAGAGTAGTGCTCATGTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTc < 1:902081/76‑1 (MQ=255) ccAAATCTTTCTGCGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTcc > 1:1055411/1‑76 (MQ=255) ccAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTcc > 1:670621/1‑76 (MQ=255) ccAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTcc > 1:670612/1‑76 (MQ=255) cAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCct > 1:1501831/1‑76 (MQ=255) cAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCct < 1:977078/76‑1 (MQ=255) aaaTCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCctc < 1:418141/76‑1 (MQ=255) tCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTaa > 1:364640/1‑76 (MQ=255) cTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAat < 1:1573116/76‑1 (MQ=255) ttCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAatat > 2:812409/1‑76 (MQ=255) ttCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAatat < 2:1380612/76‑1 (MQ=255) ttCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAatat > 1:1337310/1‑76 (MQ=255) cTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAatatat < 1:1423486/76‑1 (MQ=255) tGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATAtt < 2:1469299/76‑1 (MQ=255) tGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATAtt > 2:547464/1‑76 (MQ=255) gagaGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTg < 2:235448/76‑1 (MQ=255) gagTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTa > 2:1129507/1‑76 (MQ=255) gagTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTa < 2:1133297/76‑1 (MQ=255) gagTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTa < 1:334324/76‑1 (MQ=255) gtagtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAAt > 1:1157099/1‑76 (MQ=255) gtagtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAAt > 1:85221/1‑76 (MQ=255) gtagtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAAt > 1:1399824/1‑76 (MQ=255) gtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGat > 1:1589121/1‑76 (MQ=255) tGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGata > 1:1268555/1‑76 (MQ=255) cTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGataat < 2:919760/76‑1 (MQ=255) tCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGataata < 1:1315129/76‑1 (MQ=255) tCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGataata > 1:75005/1‑76 (MQ=255) cATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGATAatat < 1:589642/76‑1 (MQ=255) aTTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGATAATATc > 2:1301302/1‑76 (MQ=255) tttAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGATAATATCa > 1:1582322/1‑76 (MQ=255) | ATGAAGAATATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGATAATATCA > REL606/799124‑799274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |