New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2035140 | NA (NA) | 7 (0.350) | 4/134 | 2.2 | 20.0% | coding (717/768 nt) | wbbD | putative glycosyltransferase WbbD |
? | REL606 | = 2035556 | 28 (1.420) | coding (301/768 nt) | wbbD | putative glycosyltransferase WbbD |
CATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2035061‑2035140 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgatataAATAGAACAAATCGATTCGAATGTATACTTGATTTTATGACTAAGAATGGTGATGTTCATATTCTTAGCTCTT < REL606/2035556‑2035484 CATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGA > 1:284901/1‑76 AATATCCTTGTGATAATATTTATTATTAAGTCTTGATATGATATAAATAGAACAAATCGATTCGAATGTATATTTa > 2:672473/1‑75 AATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATAAATAGAACAAATCGATTCGAATGTATACTTG > 2:672460/1‑76 ATAATATTTATTATAAAGTCTTGATATGATATAAATAGAACAAATCGATTCGAATGTATACTTGATTTTATGACTA > 2:422553/1‑76 ATAATATTTATTATAAAGTCTTGATATGATATAAATAGAACAAATCGATTCGAATGTATACTTGATTTTATGACTA > 2:422554/1‑76 TTTATTATAAAGTCTTGATATGATATAAATAGAACAAATCGATTCGAATGTATACTTGATTTTATGACTAAGAATG > 2:95311/1‑76 TTTATTATAAAGTCTTGATATGACATAAATAGAACCAATCGATTGGAATGTATATTTGGTTTTATGACTAAGAATG > 2:244526/1‑76 GTCTTGATATGATATAAATAGAACAAATCGATTCGAATGTATACTTGATTTTATGACTAAGAATGGTGATGTTCAT > 2:664065/1‑76 TATAAATAGAACAAATCGATTCGAATGTATACTTGATTTTATGACTAAGAATGGTGATGTTCATATTCTTAGCTCT > 2:642574/1‑76 ATAAATAGAACAAATCGATTCGAATGTATACTTGATTTTATGACTAAGAATGGTGATGTTCATATTCTTAGCTCTT > 2:357080/1‑76 CATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2035061‑2035140 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgatataAATAGAACAAATCGATTCGAATGTATACTTGATTTTATGACTAAGAATGGTGATGTTCATATTCTTAGCTCTT < REL606/2035556‑2035484 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |